TABLE 1 in Calcarisporium yuanyangense sp. nov. (Calcarisporiaceae, Hypocreales), a fungal pathogen isolated from Ophiocordyceps nutans
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TABLE 1. Strains and GenBank accession numbers were used in the phylogenetic analyses. Species nameStrainITSnrSSUnrLSUtef-1αrpb2Akanthomyces aculeatusHUA 186145-MF416572MF416520MF416465-Akanthomyces attenuatusCBS 402.78-AF339614AF339565EF468782EF468935Aschersonia badiaBCC 8105-DQ522537DQ518752DQ522317DQ522411Aschersonia placentaBCC 7869-EF469121EF469074EF469056EF469104Balansia henningsianaAEG 96-27aJN049815AY545723AY545727AY489610DQ522413Balansia pilulaeformisAEG 94-2JN049816AF543764AF543788DQ522319DQ522414Beauveria australisARSEF 4598NR111597--HQ880995HQ880933Beauveria bassianaARSEF 1564-EU334676-HQ880974HQ880905Bionectria pityrodesCBS 102033AF210672AY249899AF210672--Bionectria vesiculosaHMAS 183151NR119828HM050302--Blackwellomyces cardinalisOSC 93609-AY184973AY184962DQ522325DQ522422Blackwellomyces pseudomilitarisBCC 1919-MF416588MF416534MF416478MF416440Calcarisporium arbusculaCBS 221.73AY271809AY271796---Calcarisporium arbusculaCBS 900.68KT945003KT945002KX442598KX442596KX442597Calcarisporium cordycipiticolaCGMCC 3.17905KT944999KT944998KX442599KX442593KX442594Calcarisporium cordycipiticolaCGMCC 3.17904KT945001KT945000KX442604KX442605KX442607Calcarisporium xylariicolaHMAS 276836KX442603KX442602KX442601KX442595KX442606Calcarisporium yuanyuangenseYFCC 22099256OQ954173OQ954172OQ954171OQ981389OQ981390Claviceps purpureaSA cp11-EF469122EF469075EF469058EF469105Conoideocrella luteorostrataNHJ 12516JN049860EF468994EF468849EF468800EF468946Conoideocrella tenuisNHJ 345.01-EU369111EU369045EU369030EU369088Cordyceps albocitrinaspat 07174-MF416575-MF416467-Cordyceps militarisYFCC 6587-MN576762MN576818MN576988MN576932Cordyceps pleuricapitataNBRC 100745JN943304JN941750JN941391KF049679KF049667Drechmeria coniosporaCBS 596.92AF106018AF106012---Drechmeria gunniiOSC 76404-AF339572AF339522AY489616DQ522426Drechmeria zeosporaCBS 335.80MH861269-AF339540EF469062EF469109Epichloe elymiC. Schardl 760--AY986924AY986951Gibellula longisporaNHJ 12014-EU369098-EU369017EU369075Gibellula pulchraNHJ 10808-EU369099EU369035EU369018EU369076Harposporium anguillulaeARSEF 5593--AY636081--Harposporium cycloidesARSEF 5599--AY636083--Harposporium harposporiferumARSEF 5472-AF339569NG060621--Harposporium helicoidesArsef 5354-AF339577AF339527--Hevansia nelumboidesBCC 41864JN201871JN201863JN201873JN201867-Hevansia novoguineensisNHJ 13161-EU369093-EU369011-Hirsutella guyanaARSEF 878KM652158KM652068KM652112KM651994-Hirsutella rhossiliensisARSEF 2931KM652168KM652078KM652121KM652004-Hirsutella uncinataDAOM 229256AY365468NG064891---Hypocrea americanaAFTOL-ID 52DQ491488AY544693AY544649DQ471043-Hypocrea luteaATCC 208838-AF543768AF543791AF543781DQ522446Hypocrea nigricansNBRC 30611JN943369JN941681JN941464--Hypocrea rufaDAOM JBT1003JN942883JN939042JN938865--Hypocrella cf discoideaARSEF 7697--AY986910AY986936-Hypocrella schizostachyiBCC 14123-DQ522557DQ518771DQ522346DQ522447Hypomyces polyporinusATCC 76479-AF543771AF543793AF543784-Liangia sinensisYFCC 3103MN576831MN576726MN576782MN576952MN576898Liangia sinensisYFCC 3104MN576832MN576727MN576783MN576953MN576899Metarhizium anisopliaeCBS 130.71MT078884MT078868MT078853MT078845MT078918Moelleriella madidiensisCUP 067776--AY986915AY986941-Moelleriella rhombisporaCUP 067534--EU392614EU392679-Ophiocordyceps agriotidisARSEF 5692JN049819DQ522540DQ518754DQ522322DQ522418Ophiocordyceps annulataCEM 303-KJ878915-KJ878962-Ophiocordyceps brunneirubraBCC 14384MH754736-MH753690GU797121MK751468Ophiocordyceps satoiJ7-KX713653KX713599KX713683-Ophiocordyceps sinensisEFCC 7287JN049854EF468971EF468827EF468767EF468924Ophiocordyceps stylophoraOSC 111000JN049828DQ522552DQ518766DQ522337DQ522433Ophiocordyceps yakusimensisHMAS 199604-KJ878938KJ878902-KJ878953Paraisaria amazonicaHUA 186143-KJ917562KJ917571KM411989KM411982Paraisaria blattarioidesHUA 186093-KJ917559KJ917570KM411992-Paraisaria gracilioidesHUA 186095-KJ917556-KM411994-Paraisaria gracilisEFCC 8572JN049851EF468956EF468811EF468751EF468912Perennicordyceps cuboideaNBRC 103836JN943332JN941721JN941420AB972951AB972955Perennicordyceps paracuboideaNBRC 100942JN943337JN941711JN941430AB972954AB972958Perennicordyceps prolificaNBRC 101750JN943340JN941708JN941433AB972953AB972957Perennicordyceps ryogamiensisNBRC 101751JN943343JN941703JN941438KF049688-Pleurocordyceps aurantiacusMFLUCC 17-2113MG136916MG136904MG136910MG136875MG136870Pleurocordyceps lianzhouensisGIMYY9603EU149922KF226249KF226250KF226252-Pleurocordyceps marginaliradiansMFLU 17-1582MG136920MG136908MG136914MG136878MG271931Pleurocordyceps yunnanensisYHCPY1005-KF977848KF977848KF977850KF977854Polycephalomyces formosusNBRC 100686MN586830MN586821-MN598054MN598061Polycephalomyces ramosusNBRC 109983AB925946-AB925982--Polycephalomyces tomentosusBL 4KF049666KF049623KF049641KF049697KF049678Purpureocillium lavendulumFMR 10376--FR775489FR775516-Purpureocillium takamizusanenseNHJ 3582-EU369097EU369034EU369015-Samsoniella aurantiaTBRC 7271MF140764-MF140728MF140846MF140818Samsoniella inthanonensisTBRC 7915MF140761-MF140725MF140849MF140815Samuelsia chalalensisCUP 067856--EU392637EU392691-Samuelsia rufobrunneaCUP 067858--AY986918AY986944-Simplicillium lanosoniveumCBS 704.86AJ292396AF339602AF339553DQ522358DQ522464Simplicillium obclavatumCBS 311.74MH860859AF339567AF339517EF468798-Tolypocladium amazonenseLA100HQ022485KF747309KF747129KF747094-Tolypocladium cylindrosporumARSEF 2920MG228381--MG228390MG228387Tolypocladium geodesCBS 723.70NR164431----Tolypocladium inflatumOSC 71235JN049844EF469124EF469077EF469061EF469108Trichoderma aggressivumCBS100525-JN939655JN939837-JQ014130Trichoderma virideGJS89-127-AY489694AY489726AY489621-Trichothecium roseumPh6KY234210-KY234151-- ......continued on the next page
表1 系统发育分析所用菌株及其GenBank(基因银行)登录号。表格列依次为:物种名称、菌株编号、ITS nr(内转录间隔区序列,Internal Transcribed Spacer)、SSU nr(小亚基核糖体RNA基因序列,Small Subunit ribosomal RNA)、LSU(大亚基核糖体RNA基因序列,Large Subunit ribosomal RNA)、tef-1α(翻译延伸因子1α基因序列,translation elongation factor 1 alpha)、rpb2(RNA聚合酶II第二大亚基基因序列,RNA polymerase II second largest subunit),其中"--"表示无对应序列数据。具体菌株信息如下: 刺状刺座霉(Akanthomyces aculeatus):菌株HUA 186145,ITS nr登录号MF416572,SSU nr登录号MF416520,LSU登录号MF416465,无tef-1α、rpb2序列数据 细弱刺座霉(Akanthomyces attenuatus):菌株CBS 402.78,ITS nr登录号AF339614,SSU nr登录号AF339565,LSU登录号EF468782,tef-1α登录号EF468935,无rpb2序列数据 赭赤座霉(Aschersonia badia):菌株BCC 8105,ITS nr登录号DQ522537,SSU nr登录号DQ518752,LSU登录号DQ522317,tef-1α登录号DQ522411,无rpb2序列数据 胎盘赤座霉(Aschersonia placenta):菌株BCC 7869,ITS nr登录号EF469121,SSU nr登录号EF469074,LSU登录号EF469056,tef-1α登录号EF469104,无rpb2序列数据 亨宁斯草麦角菌(Balansia henningsiana):菌株AEG 96-27a,ITS nr登录号JN049815,SSU nr登录号AY545723,LSU登录号AY545727,tef-1α登录号AY489610,rpb2登录号DQ522413 球状草麦角菌(Balansia pilulaeformis):菌株AEG 94-2JN,ITS nr登录号049816,SSU nr登录号AF543764,LSU登录号AF543788,tef-1α登录号DQ522319,rpb2登录号DQ522414 澳大利亚白僵菌(Beauveria australis):菌株ARSEF 4598,ITS nr登录号NR111597,无SSU nr序列数据,LSU登录号HQ880995,tef-1α登录号HQ880933,无rpb2序列数据 球孢白僵菌(Beauveria bassiana):菌株ARSEF 1564,ITS nr登录号EU334676,无SSU nr序列数据,LSU登录号HQ880974,tef-1α登录号HQ880905,无rpb2序列数据 松皮生赤壳(Bionectria pityrodes):菌株CBS 102033,ITS nr登录号AF210672,SSU nr登录号AY249899,LSU登录号AF210672,无tef-1α、rpb2序列数据 泡囊赤壳(Bionectria vesiculosa):菌株HMAS 183151,ITS nr登录号NR119828,SSU nr登录号HM050302,无LSU、tef-1α、rpb2序列数据 cardinalis布莱克韦尔霉(Blackwellomyces cardinalis):菌株OSC 93609,无ITS nr序列数据,LSU登录号AY184973,SSU nr登录号AY184962,tef-1α登录号DQ522325,rpb2登录号DQ522422 假军用布莱克韦尔霉(Blackwellomyces pseudomilitaris):菌株BCC 1919,ITS nr登录号MF416588,SSU nr登录号MF416534,LSU登录号MF416478,tef-1α登录号MF416440,无rpb2序列数据 灌木状钙囊霉(Calcarisporium arbuscula):菌株CBS 221.73,ITS nr登录号AY271809,SSU nr登录号AY271796,无LSU、tef-1α、rpb2序列数据 另一株灌木状钙囊霉(Calcarisporium arbuscula):菌株CBS 900.68,ITS nr登录号KT945003,SSU nr登录号KT945002,LSU登录号KX442598,tef-1α登录号KX442596,rpb2登录号KX442597 ……续下页



