Additional file 11 of Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome

Additional file 11: Table S9. The SR1 and GN02 metapangenomes. (a) Reference information on GN02 genomes used for analysis. (b) Reference information on SR1 genomes used for analysis. (c) Summary information of GN02 pangenome. (d) Summary information of SR1 pangenome. (e) Average nucleotide identity (ANI) pairwise coverage values for the 25 GN02 genomes. (f) ANI percent identity values for the GN02 genomes. (g) ANI pairwise coverage values for the 14 SR1 genomes. (h) ANI percent identity values for the SR1 genomes. (i) Occurrence summary for the GN02 genomes in the HMP oral metagenomes. (j) Non-outlier mean coverage of the GN02 genomes in the HMP samples as computed by anvi-mcg-classifier. (k) The portion of reads that mapped to each GN02 genome from each of the HMP samples. (l) Occurrence summary for the SR1 genomes in the HMP oral metagenomes. (m) Non-outlier mean coverage of the SR1 genomes in the HMP samples as computed by anvi-mcg-classifier. (n) The portion of reads that mapped to each GN02 genome from each of the HMP samples.

附加文件11：表S9。SR1与GN02宏泛基因组（metapangenome）。
(a) 用于本次分析的GN02基因组参考信息。
(b) 用于本次分析的SR1基因组参考信息。
(c) GN02泛基因组（pangenome）汇总信息。
(d) SR1泛基因组汇总信息。
(e) 25株GN02基因组的平均核苷酸一致性（Average Nucleotide Identity, ANI）成对覆盖度数值。
(f) GN02基因组的ANI百分比一致性数值。
(g) 14株SR1基因组的ANI成对覆盖度数值。
(h) SR1基因组的ANI百分比一致性数值。
(i) 人类微生物组计划（Human Microbiome Project, HMP）口腔宏基因组中GN02基因组的出现情况汇总。
(j) 经anvi-mcg-classifier计算得到的HMP样本中GN02基因组的非异常值平均覆盖度。
(k) HMP各样本中比对至各GN02基因组的测序读段占比。
(l) 人类微生物组计划（HMP）口腔宏基因组中SR1基因组的出现情况汇总。
(m) 经anvi-mcg-classifier计算得到的HMP样本中SR1基因组的非异常值平均覆盖度。
(n) HMP各样本中比对至各GN02基因组的测序读段占比。