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Annotation of topology and subdomains for families in the CPA/AT transporters.

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Figshare2021-08-17 更新2026-04-28 收录
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https://figshare.com/articles/dataset/Annotation_of_topology_and_subdomains_for_families_in_the_CPA_AT_transporters_/15183124
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The orientation (Nin, Nout) describes the location of the N-termini of the protein. Comparison of classification of families from this work, TCDB and Pfam are shown. The name in bold preceding the semicolon denotes superfamily, the name following the semicolon denotes the family. Families with unassigned superfamily start with a Semicolon. H, RH and BH indicate transmembrane helix, Reentrant helix and Broken helix respectively. When a homologous template was found with an E-value better than 1*10−3 it was shown. The Pcons scores for the trRosetta models are also listed.

取向(Nin, Nout)用于表征蛋白质N端的位置。本研究、跨膜蛋白分类数据库(TCDB)与蛋白质家族数据库(Pfam)的家族分类对比结果如下。分号前的粗体名称代表超家族(superfamily),分号后的名称代表家族;未分配超家族的家族以分号起始。H、RH与BH分别代表跨膜螺旋(transmembrane helix)、折返螺旋(Reentrant helix)及断裂螺旋(Broken helix)。当找到期望值(E-value)优于1×10^-3的同源模板时,将予以展示。trRosetta模型的Pcons评分亦一并列出。
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2021-08-17
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