Additional file 1 of Integrated transcriptome and methylome analyses reveal the molecular regulation of drought stress in wild strawberry (Fragaria nilgerrensis)

Additional file 1: Table S1. Statistics of RNA-seq reads. Table S2. Data description of BS-Seq reads for the four F.nilgerrensis samples with three replicates. Table S3. Whole-genome methylation of  F. nilgerrensis. Table S4-1.The promoter regions DMGs and DEGs shared genes at all time points. Table S4-2.The genebody regions DMGs and DEGs shared genes at all time points. Table S5. Differentially expressed transcription factors (TF). Table S6. Differentially expressed transcription factors (TFs) with methylation in promoter region. Table S7. List of primer pairs used for qRT-PCR.

附加文件1：表S1：RNA测序（RNA-seq）读段统计信息。
表S2：含3次生物学重复的4份F. nilgerrensis样本的亚硫酸氢盐测序（Bisulfite sequencing, BS-seq）读段数据描述。
表S3：F. nilgerrensis全基因组甲基化情况。
表S4-1：所有时间点共有的启动子区差异甲基化基因（Differentially Methylated Genes, DMGs）与差异表达基因（Differentially Expressed Genes, DEGs）交集基因集。
表S4-2：所有时间点共有的基因本体区差异甲基化基因与差异表达基因交集基因集。
表S5：差异表达转录因子（Transcription Factors, TFs）。
表S6：启动子区域存在甲基化修饰的差异表达转录因子。
表S7：定量实时聚合酶链反应（quantitative Real-Time Polymerase Chain Reaction, qRT-PCR）所用引物对列表。