遇见数据集

Data from: Genetic structure and effective population size of Sydney rock oysters in eastern Australia

收藏
Zenodo2021-03-09 更新2026-05-25 收录
数据链接:
官方服务:

资源简介:

We provide a number of data files associated with the article "Genetic structure and effective population size of Sydney rock oysters in eastern Australia" (DOI: 10.1007/s10592-021-01343-4). These include:<br> - VCF file generated following the SNP calling methods in the article. File contains genotype information for the primary sample set (n=363), filtered to retain biallelic SNPs with &lt;25% missing data (75,231 SNPs). <br> - Sample metadata, containing site ID, individual ID, and the latitude &amp; longitude of sampling location.<br> - Main script used to generate data and conduct analyses described in the article.<br> - Zip folder containing files associated with demographic modelling using moments Other relevant data can be found in the Electronic Supplementary Material for the article.

本数据集配套提供与论文"澳大利亚东部悉尼岩牡蛎的遗传结构与有效种群规模"(DOI: 10.1007/s10592-021-01343-4)相关的多份数据文件,具体包含以下内容:<br>- 依据论文所述单核苷酸多态性(Single Nucleotide Polymorphism, SNP)检测方法生成的VCF(Variant Call Format)文件:该文件涵盖核心样本集(n=363)的基因型信息,经筛选保留了缺失率低于25%的双等位基因SNP位点,共计75,231个。<br>- 样本元数据文件:包含采样位点编号、个体编号以及采样地点的经纬度信息。<br>- 用于生成论文所述数据并开展相关分析的主脚本文件。<br>- 压缩文件夹:内含使用moments进行种群人口统计建模的相关文件。<br>其余相关数据可查阅该论文的电子补充材料。

提供机构:
Zenodo
创建时间:
2021-03-09
二维码
社区交流群
二维码
科研交流群
商业服务