S-LDSC reference files
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#1/15/2024: New version includes 107 independent summary statistics in the file sumstats_indep107.tgz#8/28/2023: New version includes the file hm3_no_MHC.list Files required to partition heritability with S-LDSC. Reference, baseline and baseline-LD files for EUR populations:1000G_Phase3_baseline_v1.2_ldscores.tgz1000G_Phase3_baselineLD_v2.2_ldscores.tgz1000G_Phase3_baselineLD_v2.3_ldscores.tgz1000G_Phase3_frq.tgz1000G_Phase3_ldscores.tgz1000G_Phase3_plinkfiles.tgz1000G_Phase3_weights_hm3_no_MHC.tgzbaselineLD_v2.2_bedfiles.tgzGRCh38.tgzreadme_baseline_versions Sumstats files for EUR populations:sumstats_indep107.tgz (NEW)sumstats.tgz (old) Reference, baseline and baseline-LD files for EAS populations:1000G_Phase3_EAS_baseline_v1.2_ldscores.tgz1000G_Phase3_EAS_baselineLD_v2.2_ldscores.tgz1000G_Phase3_EAS_plinkfiles.tgz1000G_Phase3_EAS_weights_hm3_no_MHC.tgzList of HapMap3 SNPs outputed when computing LD scores:hm3_no_MHC.list
# 2024年1月15日:新版本新增sumstats_indep107.tgz文件,内含107组独立汇总统计量。 # 2023年8月28日:新版本新增hm3_no_MHC.list文件。 本数据集包含用于通过S-LDSC开展遗传力分区分析的全部所需文件。 欧洲人群(EUR)的参考文件、基线文件及基线-LD得分文件: 1000G_Phase3_baseline_v1.2_ldscores.tgz 1000G_Phase3_baselineLD_v2.2_ldscores.tgz 1000G_Phase3_baselineLD_v2.3_ldscores.tgz 1000G_Phase3_frq.tgz 1000G_Phase3_ldscores.tgz 1000G_Phase3_plinkfiles.tgz 1000G_Phase3_weights_hm3_no_MHC.tgz baselineLD_v2.2_bedfiles.tgz GRCh38.tgz readme_baseline_versions 欧洲人群的汇总统计文件: sumstats_indep107.tgz(新增) sumstats.tgz(旧版本) 东亚人群(EAS)的参考文件、基线文件及基线-LD得分文件: 1000G_Phase3_EAS_baseline_v1.2_ldscores.tgz 1000G_Phase3_EAS_baselineLD_v2.2_ldscores.tgz 1000G_Phase3_EAS_plinkfiles.tgz 1000G_Phase3_EAS_weights_hm3_no_MHC.tgz 计算连锁不平衡(LD)得分时输出的HapMap3 SNP列表文件:hm3_no_MHC.list



