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Induction of the Estrogen Specific Mitogenic Response of MCF-7 Cells by Selected Analogues of Estradiol-17β: A 3D QSAR Study

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https://figshare.com/articles/dataset/Induction_of_the_Estrogen_Specific_Mitogenic_Response_of_MCF-7_Cells_by_Selected_Analogues_of_Estradiol-17_A_3D_QSAR_Study/3683439
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Analogues of estradiol-17β (E2) have been evaluated for estrogen receptor (ER) binding affinity and mitogenic potential in the human breast cancer cell line MCF-7. These 42 compounds represent subtle modifications of the natural estrogen structure through the placement of hydroxyl, amino, nitro, or iodo groups around the ring system in addition to, or as replacement of, the 3- and 17β-hydroxyls of E2. The mitogenic activity of the analogues was found to be related to ER binding only to a limited extent. In order to elucidate structural features that are uniquely responsible for receptor binding affinity or mitogen potential of estrogens, the three-dimensional quantitative structure−activity (QSAR) method Comparative Molecular Field Analysis (CoMFA) was employed. Separate CoMFA models for receptor binding and cell growth stimulation were optimized through the use of various alignment rules and region step size. Whereas the CoMFA contour plots did outline the shared structural requirements for the two measured biological properties, specific topological features in this set of estrogens were delineated that distinguish mitogenic potential from ER binding ability. In particular, steric interference zones which affected growth extend in a band from above the A-ring to position 4 and below, whereas the ER binding steric interference zones are limited to isolated polyhedra in the 1,2 and 4 positions and the α face of the B-ring. In addition, electronegative features located around the A-, B-, or C-rings contribute to receptor affinity. However, growth is dependent only on electronegative and electropositive properties near the 3-position. In a final QSAR model for the mitogenic response, the value of ER binding was included along with structural features as a descriptor in CoMFA. The resulting 3D-QSAR has the most predictive potential of the models in this study and can be considered a prototype model for the general evaluation of a steroidal estrogen's growth stimulating ability in MCF-7 cells. For example, the location of D-ring contours illustrate the model's preference for 17β-hydroxy steroids over the less mitogenic 17α- and 16α-hydroxy compounds. In addition, the enhanced mitogenic effect of steric bulk in the 11α-position is also evident. The QSAR studies in this report illustrate the fact that while ER binding may be a required factor of the estrogen dependent growth response in MCF-7 cells, particular structural characteristics, in addition to those responsible for tight receptor binding, must be present to induce an optimal mitogenic response. Therefore, this report demonstrates that the CoMFA QSAR method can be utilized to characterize structural features of test compounds that account for different types of estrogenic responses.

本研究针对17β-雌二醇(estradiol-17β,E2)的类似物展开评估,检测其在人乳腺癌细胞系MCF-7中的雌激素受体(estrogen receptor, ER)结合亲和力与促有丝分裂活性。本次研究涉及的42种化合物均为天然雌激素结构的细微修饰产物,通过在环系周围引入羟基、氨基、硝基或碘基,或是替代E2的3位与17β-羟基基团得到。研究发现,此类类似物的促有丝分裂活性与ER结合亲和力仅存在有限的相关性。为阐明雌激素受体结合亲和力或促有丝分裂活性对应的专属结构特征,本研究采用了三维定量构效关系(three-dimensional quantitative structure-activity relationship, 3D-QSAR)方法——比较分子场分析(Comparative Molecular Field Analysis, CoMFA)。通过调整不同的对齐规则与区域步长,分别针对受体结合活性与细胞增殖刺激活性优化了CoMFA模型。尽管CoMFA等高线图确实勾勒出了两种检测生物学特性共有的结构需求,但本数据集的特定拓扑特征仍可区分促有丝分裂活性与ER结合能力。具体而言,影响细胞增殖的空间位阻干扰区域呈带状分布,从A环上方延伸至4位及下方区域;而与ER结合相关的空间位阻干扰区域仅局限于1、2、4位以及B环α面的孤立多面体区域。此外,位于A、B或C环周围的电负性特征有助于提升受体结合亲和力,但细胞增殖活性仅依赖于3位附近的电负性与电正性特征。在针对促有丝分裂响应的最终QSAR模型中,我们将ER结合亲和力数值与结构特征一同作为CoMFA的描述符纳入模型。最终得到的3D-QSAR模型具备本研究中所有模型最优的预测潜力,可作为通用评估甾体雌激素在MCF-7细胞中促生长能力的原型模型。例如,D环等高线的分布体现了该模型对17β-羟基甾体的偏好,其促有丝分裂活性优于促增殖能力较弱的17α-羟基与16α-羟基化合物;此外,11α位空间体积增大带来的促有丝分裂效应增强也得到了印证。本研究的QSAR分析结果表明,尽管ER结合可能是MCF-7细胞中雌激素依赖型生长响应的必要条件,但除了介导受体紧密结合的结构特征外,还需具备特定的结构属性才能诱导最优的促有丝分裂响应。综上,本研究证实CoMFA QSAR方法可用于表征测试化合物中导致不同类型雌激素响应的结构特征。
创建时间:
2016-08-19
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