Data from: A strategic sampling design revealed the local genetic structure of cold-water fluvial sculpin: a focus on groundwater-dependent water temperature heterogeneity

Data for "A strategic sampling design revealed the local genetic structure of cold-water fluvial sculpin: a focus on groundwater-dependent water temperature heterogeneity"Nakajima S, Sueyoshi M, Hirota SK, Ishiyama N, Matsuo A, Suyama Y, Nakamura F.
[sample and environmental data]1. "Individuals.xlsx"PopID, population IDs; sample, sample IDs; date, sampling date; TL, total length [mm]
2. "Populations.xlsx"PopID, population IDs; elev, elevation [m]; MT, maximum water temperature of each site [℃]; Netimi, mean net immigration rate 3. "Distance.xlsx"Matrix of waterway distance between sampling sites [km]
[VCF file after SNP detection]4. "filter_forPopGen_489snp.vcf"VCF file generated in the SNP detection section5. "filter_forBayesAss_1291snp.vcf"VCF file generated in the gene flow section
Raw MIG-seq reads were deposited in the DDBJ Sequence Read Archive (DRA011249)

本数据集关联研究论文为《策略性采样设计揭示冷水河川杜父鱼的局域遗传结构：聚焦于依赖地下水的水温异质性》，作者为Nakajima S、Sueyoshi M、Hirota SK、Ishiyama N、Matsuo A、Suyama Y、Nakamura F。

【样品与环境数据】
1. "Individuals.xlsx"：包含字段：PopID（种群编号）、sample（样品编号）、date（采样日期）、TL（总长度，单位：毫米）
2. "Populations.xlsx"：包含字段：PopID（种群编号）、elev（海拔高度，单位：米）、MT（各采样点最高水温，单位：摄氏度）、Netimi（平均净迁入率）
3. "Distance.xlsx"：采样点间航道距离矩阵（单位：千米）

【SNP检测后的VCF格式文件】
4. "filter_forPopGen_489snp.vcf"：单核苷酸多态性（Single Nucleotide Polymorphism, SNP）检测环节生成的VCF格式文件
5. "filter_forBayesAss_1291snp.vcf"：基因流分析环节生成的VCF格式文件

原始MIG-seq测序读段已提交至DDBJ序列读取档案库（DRA011249）