Yeast 4 strains chemical genomics - raw colony sizes
收藏Figshare2020-05-25 更新2026-04-08 收录
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Raw colony sizes used to compute the chemical genomics data of gene knock-outs (KO) across 4 yeast genetic backgrounds (i.e. Saccharomyces cerevisiae strains). This data represents the colony size in pixels after surface correction (columns "surface-corrected") and colony border normalization ("normalized"). Further details can be found in the "Chemical genomic data analysis" section in the referenced paper (doi: 10.15252/msb.20198831) and can be reproduced using the data and script provided in the repository associated with the paper (https://github.com/mgalardini/2018koyeast, in particular this script: https://github.com/mgalardini/2018koyeast/blob/master/src/correct_raw_sizes.py).<br>
本数据集包含用于计算4种酵母遗传背景(即酿酒酵母(Saccharomyces cerevisiae)菌株)基因敲除(Knock-out,KO)化学基因组学数据的原始菌落尺寸。该数据记录了经表面校正(对应列名为"surface-corrected")与菌落边界归一化(对应列名为"normalized")后的像素级菌落尺寸。更多详细信息可参见所引用论文的"化学基因组数据分析"章节(doi: 10.15252/msb.20198831),并可通过该论文关联仓库中提供的数据与脚本进行复现,仓库地址为https://github.com/mgalardini/2018koyeast,具体使用脚本为https://github.com/mgalardini/2018koyeast/blob/master/src/correct_raw_sizes.py。
创建时间:
2020-05-25



