遇见数据集

Predictions to Benchmark AlphaFold2 for Small Linear Motifs (SLiM) prediction - PART5/5

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Zenodo2025-06-04 更新2026-05-29 收录
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AlphaFold2 models from the publication entitled "A simple workflow to identify novel Small Linear Motif (SLiM)-mediated interactions with AlphaFold". ! This is the part5/5. You need all five parts in the same folder for proper unzip. If you are Windows or Mac users, you will need unziping app such as "7zip" or "The unarchiver" respectively. You should unzip the .zip file with .z0i present within the same location. This archive includes AlphaFold2 Multimer v3 predictions for the 242 SLiM-partner from ELM_dataset and noPDB_dataset. Each prediction is separated in a unique folder. Each folder contains five .pdb structures and their associated .json score files, as well as the .a3m multiple sequence alignment file. Additionally, it contains .pickle files required for minD.

本数据集包含来自题为《利用AlphaFold识别新型小型线性基序(Small Linear Motif, SLiM)介导的相互作用的简易工作流程》的发表论文的AlphaFold2模型。 ⚠ 本数据集为第5/5部分。需将全部5个分卷置于同一文件夹方可正常解压。Windows用户需使用"7zip"等解压工具,Mac用户则需使用"The Unarchiver"等解压软件。请在包含.z0i文件的同一目录下对该.zip压缩包进行解压。 本压缩包包含针对来自ELM_dataset与noPDB_dataset的242个SLiM相互作用伴侣的AlphaFold2 Multimer v3预测结果。每项预测结果均单独存放于独立文件夹中。每个文件夹内包含5个.pdb结构文件及其对应的.json评分文件,以及.a3m多序列比对文件。此外,文件夹中还包含minD运行所需的.pickle文件。

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Zenodo
创建时间:
2025-05-16
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