Urinary Proteomics Pilot Study for Biomarker Discovery and Diagnosis in Heart Failure with Reduced Ejection Fraction
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https://figshare.com/articles/dataset/Urinary_Proteomics_Pilot_Study_for_Biomarker_Discovery_and_Diagnosis_in_Heart_Failure_with_Reduced_Ejection_Fraction/3449732
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Background
Biomarker discovery and new insights into the pathophysiology of heart failure with reduced ejection fraction (HFrEF) may emerge from recent advances in high-throughput urinary proteomics. This could lead to improved diagnosis, risk stratification and management of HFrEF.
Methods and Results
Urine samples were analyzed by on-line capillary electrophoresis coupled to electrospray ionization micro time-of-flight mass spectrometry (CE-MS) to generate individual urinary proteome profiles. In an initial biomarker discovery cohort, analysis of urinary proteome profiles from 33 HFrEF patients and 29 age- and sex-matched individuals without HFrEF resulted in identification of 103 peptides that were significantly differentially excreted in HFrEF. These 103 peptides were used to establish the support vector machine-based HFrEF classifier HFrEF103. In a subsequent validation cohort, HFrEF103 very accurately (area under the curve, AUC = 0.972) discriminated between HFrEF patients (N = 94, sensitivity = 93.6%) and control individuals with and without impaired renal function and hypertension (N = 552, specificity = 92.9%). Interestingly, HFrEF103 showed low sensitivity (12.6%) in individuals with diastolic left ventricular dysfunction (N = 176). The HFrEF-related peptide biomarkers mainly included fragments of fibrillar type I and III collagen but also, e.g., of fibrinogen beta and alpha-1-antitrypsin.
Conclusion
CE-MS based urine proteome analysis served as a sensitive tool to determine a vast array of HFrEF-related urinary peptide biomarkers which might help improving our understanding and diagnosis of heart failure.
研究背景
射血分数降低型心力衰竭(heart failure with reduced ejection fraction, HFrEF)的生物标志物发现与病理生理学新认知,或可从近年来高通量尿液蛋白质组学的技术进展中获得突破,有望推动HFrEF的诊断、风险分层与临床管理水平提升。
研究方法与结果
采用在线毛细管电泳-电喷雾电离微型飞行时间质谱(CE-MS)对尿液样本进行分析,以获取个体尿液蛋白质组图谱。在初始生物标志物发现队列中,对33例HFrEF患者与29例年龄、性别匹配的非HFrEF个体的尿液蛋白质组图谱进行分析,共鉴定出103种在HFrEF患者中排泄水平存在显著差异的肽段。以此103种肽段为基础,构建了基于支持向量机的HFrEF分类器HFrEF103。在后续验证队列中,HFrEF103展现出极高的区分效能(曲线下面积AUC=0.972):可准确区分94例HFrEF患者与552例合并或不合并肾功能受损及高血压的对照个体,其灵敏度为93.6%,特异度为92.9%。值得注意的是,HFrEF103对176例左心室舒张功能障碍个体的识别灵敏度仅为12.6%。与HFrEF相关的肽类生物标志物主要包含I型与III型纤维状胶原蛋白片段,此外还涉及纤维蛋白原β亚基、α1-抗胰蛋白酶等蛋白的片段。
研究结论
基于CE-MS的尿液蛋白质组分析可作为一种高灵敏度的检测手段,用以鉴定大量与HFrEF相关的尿液肽类生物标志物,这将有助于深化我们对心力衰竭的认知并提升其诊断水平。
创建时间:
2016-06-21



