A zinc knuckle gene on the Y chromosome (zkY) determines sex in Atlantic cod (Gadus morhua) - Supporting information

S1 File. Atlantic cod gadMor2.1 genome assembly.<br>S2 File. The position and the flanking sequences of the nine sex-specific SNPs on LG11 that is heterozygous in all 49 males and homozygous in all 53 females of Atlantic cod.<br>S3 File. The X-sequence and the Y- sequence, including codzkY, in the gadMor2.1 assembly. <br>S4 File. Oxford nanopore sequences of Atlantic cod that aligned to the X- and Y- sequences in the gadMor2.1 assembly. <br>S5 Table. The position of the eight autosomal gene copies of cod zkY in gadMor2.1 assembly. <br>S6 File. MAFFT alignments of cod zkY and the eight autosomal copies in Atlantic cod. <br>S7 File. MAFFT alignments of the Atlantic cod Y-sequence with other gadoids. <br>S8 File. MAFFT alignments of the Atlantic cod X-sequence with other gadoids. <br>S9 File. 102 samples ids, sex and ENA accession id.<br>S10a and S10b File. The long-range miseq illumina data.<br>

S1 文件：大西洋鳕 gadMor2.1 基因组组装序列。S2 文件：位于连锁群11（LG11）上的9个性别特异性单核苷酸多态性（Single Nucleotide Polymorphism, SNPs）的位点及其侧翼序列，该位点在大西洋鳕的全部49尾雄性个体中呈杂合状态，在全部53尾雌性个体中呈纯合状态。S3 文件：gadMor2.1 组装序列中包含codzkY的X染色体序列与Y染色体序列。S4 文件：与gadMor2.1组装序列中的X、Y染色体序列比对匹配的大西洋鳕牛津纳米孔（Oxford nanopore）测序序列。S5 表格：gadMor2.1 组装序列中cod zkY的8个常染色体基因拷贝的位点信息。S6 文件：大西洋鳕中cod zkY与其8个常染色体同源拷贝的MAFFT多重序列比对结果。S7 文件：大西洋鳕Y染色体序列与其他鳕形目物种序列的MAFFT多重序列比对结果。S8 文件：大西洋鳕X染色体序列与其他鳕形目物种序列的MAFFT多重序列比对结果。S9 文件：102个样本的编号、性别及欧洲核苷酸档案馆（European Nucleotide Archive, ENA）登录号。S10a与S10b 文件：长片段MiSeq Illumina测序数据。