Additional file 2 of Identification of a cytokine-dominated immunosuppressive class in squamous cell lung carcinoma with implications for immunotherapy resistance

Additional file 2: Table S1. Publicly available data sets used in this study. Table S2. Tools and software used in this study. Table S3. Publicly available gene signatures used in the study. Table S4. Exhausted Immune classifier (167 genes) with significantly different expression between the Exhausted Immune class and the rest class. Table S5. Differently methylation comparison of the 216 CpG located in the promoters of 162 exhaustion related genes. Table S6. Correlation between gene expression and methylation in the 162 exhaustion related genes with differentially methylated promoter.

附加文件2：表S1。本研究中使用的公开可用数据集。表S2。本研究中使用的工具与软件。表S3。本研究中使用的公开可用基因特征（gene signatures）。表S4。耗竭免疫分类器（含167个基因），其在耗竭免疫组与其余组间存在显著差异表达。表S5。针对162个耗竭相关基因启动子区域内的216个CpG位点开展的差异甲基化比较分析。表S6。针对启动子区域存在差异甲基化的162个耗竭相关基因，其基因表达与甲基化水平间的相关性分析。