SupplData_sequences_used_for_dNdS_Havird_Sloan_MBE
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https://figshare.com/articles/dataset/SupplData_seqquences_used_for_dNdS_Havird_Sloan_MBE/3591033/2
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These are the concatenated sequences used to estimate dS, dN, and omega in Figs. 1 and 2 of Havird and Sloan MBE. They include mt-encoded OXPHOS subunits, and nuc-encoded OXPHOS subunits and glycolysis genes. They are provided for the 15 taxonomic groups we examined.<br>Also included are the individual gene sequences for plastid- and nuclear-encoded genes used to estimate omega for Arabidopsis and Vigna in Fig. 5. For some of these genes, the TAIR accession number for the genes is given instead of the gene names. <br>Any other sequences (e.g., individual genes for the concatenated alignments) will be provided upon request to Justin.Havird@colostate.edu
本数据集包含用于估算Havird与Sloan发表于《分子生物学与进化》（Molecular Biology and Evolution，MBE）图1和图2中dS、dN及ω值的拼接序列。这些序列涵盖线粒体编码（mt-encoded）的氧化磷酸化（oxidative phosphorylation，OXPHOS）亚基，以及核编码（nuc-encoded）的OXPHOS亚基与糖酵解相关基因。我们共纳入15个研究涉及的分类群的对应序列。<br>此外，本数据集还包含用于估算图5中拟南芥（Arabidopsis）和豇豆属（Vigna）物种ω值的质体编码（plastid-encoded）及核编码基因的单基因序列。其中部分基因仅提供了拟南芥信息资源库（The Arabidopsis Information Resource，TAIR）登录号，而非基因名称。<br>如需其他序列（如用于拼接比对的单基因序列），可联系Justin.Havird@colostate.edu获取
提供机构：
figshare
创建时间：
2016-08-16
