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BIP4COVID19: Impact metrics and indicators for coronavirus related publications

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Zenodo2023-01-22 更新2026-05-25 收录
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This dataset contains impact metrics and indicators for a set of publications that are related to the COVID-19 infectious disease and the coronavirus that causes it. It is based on: Τhe CORD-19 dataset released by the team of Semantic Scholar<sup>1</sup> and Τhe curated data provided by the LitCovid hub<sup>2</sup>. These data have been cleaned and integrated with data from COVID-19-TweetIDs and from other sources (e.g., PMC). The result was dataset of 129,242 unique articles along with relevant metadata (e.g., the underlying citation network). We utilized this dataset to produce, for each article, the values of the following impact measures: <em><strong>Influence:</strong></em> Citation-based measure reflecting the total impact of an article. This is based on the PageRank<sup>3</sup> network analysis method. In the context of citation networks, it estimates the importance of each article based on its centrality in the whole network. This measure was calculated using the PaperRanking (https://github.com/diwis/PaperRanking) library<sup>4</sup>. <em><strong>Popularity:</strong></em> Citation-based measure reflecting the current impact of an article. This is based on the RAM<sup>5</sup> citation network analysis method. Methods like PageRank are biased against recently published articles (new articles need time to receive their first citations). RAM alleviates this problem using an approach known as "time-awareness". This is why it is more suitable to capture the current "hype" of an article. This measure was calculated using the PaperRanking (https://github.com/diwis/PaperRanking) library<sup>4</sup>. <em><strong>Social Media Attention: </strong></em>The number of tweets related to this article. Relevant data were collected from the COVID-19-TweetIDs dataset. In this version, only tweets between Jan. 21<sup>st</sup> and Mar. 31<sup>st</sup> have been considered from the previous dataset. The rest will be included during next updates. We provide three CSV files, all containing the same information, however each having its entries ordered by a different impact measure. All CSV files are tab separated and have the same columns (PubMed_id, PMC_id, DOI, popularity_score, influence_score, tweets count). The work is based on the following publications: COVID-19 Open Research Dataset (CORD-19). 2020. Version 2020-06-27 Retrieved from https://pages.semanticscholar.org/coronavirus-research. Accessed 2020-06-27. doi:10.5281/zenodo.3715506 Chen Q, Allot A, &amp; Lu Z. (2020) Keep up with the latest coronavirus research, Nature 579:193 (version 2020-06-27) R. Motwani L. Page, S. Brin and T. Winograd. 1999. The PageRank Citation Ranking: Bringing Order to the Web. Technical Report. Stanford InfoLab. I. Kanellos, T. Vergoulis, D. Sacharidis, T. Dalamagas, Y. Vassiliou: Impact-Based Ranking of Scientific Publications: A Survey and Experimental Evaluation. TKDE 2019 Rumi Ghosh, Tsung-Ting Kuo, Chun-Nan Hsu, Shou-De Lin, and Kristina Lerman. 2011. Time-Aware Ranking in Dynamic Citation Networks. In Data Mining Workshops (ICDMW). 373–380 A Web user interface that uses these data to facilitate the COVID-19 literature exploration, can be found here. More details in our preprint here. <em><strong>Terms of use:</strong></em> These data are provided "as is", without any warranties of any kind. The data are provided under the Creative Commons Attribution 4.0 International license.

本数据集收录了与新型冠状病毒肺炎(COVID-19)及其致病冠状病毒相关的一系列学术文献的影响力指标与表征参数。本数据集基于Semantic Scholar团队发布的CORD-19数据集<sup>1</sup>以及LitCovid知识库提供的精选数据<sup>2</sup>构建。我们对上述数据进行了清洗,并整合了COVID-19-TweetIDs数据集及其他来源(如PubMed Central(PMC))的数据,最终得到包含129,242篇独立文献及其相关元数据(如底层引文网络)的数据集。 我们基于该数据集为每篇文献计算了以下影响力度量指标: <em><strong>影响力得分(Influence)</strong></em>:基于引文的全局影响力度量指标,其核心依托PageRank<sup>3</sup>网络分析方法。在引文网络语境下,该指标通过文献在整体网络中的中心性评估其重要性,采用PaperRanking库(https://github.com/diwis/PaperRanking)<sup>4</sup>完成计算。 <em><strong>流行度得分(Popularity)</strong></em>:基于引文的即时影响力度量指标,其核心依托RAM<sup>5</sup>引文网络分析方法。传统PageRank类方法对新近发表的文献存在偏见(新文献需要时间获得首次引用),而RAM通过“时间感知”机制缓解了这一问题,更适合捕捉文献当前的关注度热度,同样采用PaperRanking库<sup>4</sup>完成计算。 <em><strong>社交媒体关注度(Social Media Attention)</strong></em>:指与该文献相关的推文数量,相关数据取自COVID-19-TweetIDs数据集。本版本仅纳入了2020年1月21日至3月31日期间的推文数据,其余时段的数据将在后续更新中补充。 我们提供三份CSV格式文件,三者包含完全一致的信息,但条目排序依据分别为不同的影响力度量指标。所有CSV文件均采用制表符分隔,且共享相同的字段:PubMed_id、PMC_id、DOI、popularity_score、influence_score、tweets count。 本工作依托以下公开研究成果: COVID-19 Open Research Dataset (CORD-19). 2020. Version 2020-06-27 Retrieved from https://pages.semanticscholar.org/coronavirus-research. Accessed 2020-06-27. doi:10.5281/zenodo.3715506 Chen Q, Allot A, & Lu Z. (2020) Keep up with the latest coronavirus research, Nature 579:193 (version 2020-06-27) R. Motwani, L. Page, S. Brin and T. Winograd. 1999. The PageRank Citation Ranking: Bringing Order to the Web. Technical Report. Stanford InfoLab. I. Kanellos, T. Vergoulis, D. Sacharidis, T. Dalamagas, Y. Vassiliou: Impact-Based Ranking of Scientific Publications: A Survey and Experimental Evaluation. TKDE 2019 Rumi Ghosh, Tsung-Ting Kuo, Chun-Nan Hsu, Shou-De Lin, and Kristina Lerman. 2011. Time-Aware Ranking in Dynamic Citation Networks. In Data Mining Workshops (ICDMW). 373–380 依托本数据集实现新冠文献探索的Web用户界面可通过指定链接获取,详细信息请参阅我们的预印本。 <em><strong>使用条款(Terms of use)</strong></em>:本数据集按“现状”提供,不附带任何形式的担保。本数据集采用知识共享署名4.0国际许可协议(Creative Commons Attribution 4.0 International)发布。

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创建时间:
2020-07-06
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