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Glioma LSM2 knockdown sequencing data

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NIAID Data Ecosystem2026-05-02 收录
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https://www.ncbi.nlm.nih.gov/sra/SRP556618
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The human glioblastoma T98G cell line was cultured in DMEM medium supplemented with 10% fetal bovine serum and antibiotics. LSM2 gene knockdown was achieved using siRNA transfection with Lipofectamine RNAiMAX, and transfection efficiency was assessed by Western blotting and RT-qPCR. The experiment included three experimental groups (Group 1, 2, and 3) and three control group. After transfection, total RNA was extracted, rRNA was removed, and RNA-Seq libraries were prepared. High-throughput sequencing was performed on the Illumina NovaSeq 6000 system. The transcriptional effects of LSM2 knockdown were evaluated using GAPDH as a reference gene.

本研究中的人胶质母细胞瘤T98G细胞系(human glioblastoma T98G cell line)培养于添加10%胎牛血清与抗生素的DMEM培养基中。通过Lipofectamine RNAiMAX转染小干扰RNA(siRNA)实现LSM2基因敲低,并采用蛋白质印迹法(Western blotting)与实时定量聚合酶链反应(RT-qPCR)评估转染效率。本实验设置3个实验组(第1组、第2组、第3组)与3个对照组。转染完成后,提取总RNA并去除核糖体RNA(rRNA),随后构建RNA测序(RNA-Seq)文库,在Illumina NovaSeq 6000系统上完成高通量测序。以GAPDH作为内参基因,评估LSM2基因敲低的转录组学效应。
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2025-04-17
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