Additional file 13 of Combined nanometric and phylogenetic analysis of unique endocytic compartments in Giardia lamblia sheds light on the evolution of endocytosis in Metamonada
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Additional file 13: Table S2. Queries used for CHC HHM profile building. Table S3. Results from Pan-Eukaryotic search of CHC homologues in available Proteomes. Table S5. Queries used for CLC HHM profile building. Table S6. Results for GlCLC search in available Giardia genomes. Table S7. Results for bona fide CLC present in other genomes/transcriptomes. Table S8. Comparison of GlCLC with bona fide CLC. Table S9. Ten best hits from HHPred.
补充材料13：表S2。用于构建CHC的HHM（Hidden Markov Model）谱的查询序列。表S3：在已公开蛋白质组中对CHC同源物开展泛真核生物搜索得到的结果。表S5：用于构建CLC的HHM谱的查询序列。表S6：在现有贾第虫属基因组中开展GlCLC搜索得到的结果。表S7：其他基因组/转录组中存在的正统CLC的相关结果。表S8：GlCLC与正统CLC的比对分析结果。表S9：HHPred搜索得到的前十条最佳匹配结果。
提供机构：
Santos, Rui; Dacks, Joel B.; Pipaliya, Shweta V.; Zumthor, Jon Paulin; Ástvaldsson, Ásgeir; Faso, Carmen; Svärd, Staffan; Hehl, Adrian B.
创建时间：
2022-09-21
