Additional file 3: of Evaluation of methods for differential expression analysis on multi-group RNA-seq count data
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https://springernature.figshare.com/articles/dataset/Additional_file_3_of_Evaluation_of_methods_for_differential_expression_analysis_on_multi-group_RNA-seq_count_data/4474688/1
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R code for obtaining simulation results with replicates (Table 2 ). After execution of this R-code with default parameter settings, the average AUC values of 100 trials under the following conditions shown in Table 2 can be obtained: PDEG = 5 %, (0.5, 0.4, 0.1) for (PG1, PG2, PG3), and Nrep = 3. (R 4 kb)
本R代码用于获取带有重复实验的模拟结果(对应表2)。以默认参数设置运行此R代码后,可获得表2所示实验条件下100次试验的平均曲线下面积(Area Under the Curve, AUC)值,具体条件包括:差异表达基因占比(Percentage of Differentially Expressed Genes, PDEG)为5%,(PG1、PG2、PG3)的占比为(0.5, 0.4, 0.1),且重复次数(Number of Replicates, Nrep)=3。(R代码文件,4千字节)
提供机构:
Figshare
创建时间:
2017-12-18



