Immune families.
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下载链接:
https://figshare.com/articles/dataset/Immune_families_/30275381
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资源简介:
Legend: TRANSCRIPT_ID: contig ID code; DESCRIPTION: gene description as reported from annotation; GENE_ID: LOCxx ID code (AalbF5 annotation); T1_Mi_V-C and T5_Ca_V-C: log2-transformed values of the ratio between the FPKM values (+1 FPKM) of infected samples (V) and control samples (C) in midguts at 1 dpi and carcasses at 5 dpi; GENE_NAME: gene name, according to annotation and/or homology with known proteins; in the LRR sheet: AEGYPTI_QUERY: ID of Ae. aegypti genes used to search Ae. albopictus orthologs. Each sheet provides a detailed overview of key characteristics—including gene identifiers, functional annotations, and expression profiles—of immune-related genes belonging to the specified families: AMP, antimicrobial peptides; APOPTOSIS, genes involved in apoptosis; AUTOPHAGY, CLIP, FREP, IMD, JAK-STAT, LIPID METABOLISM, LRR, OX-PEROXIDASE, PGRP, PAF-CTL, PO-PPO, RNAi, SCVR, SRPN, TEP, TOLL-SPZ-REL, TRYPSINS, UBI, UBI_E1-ACT, UBI_E2-CONJ, UBI_E3-LIG, UBI_DE-UBI.
(XLSX)
说明:TRANSCRIPT_ID:重叠群(contig)标识符代码;DESCRIPTION:经注释报告的基因功能描述;GENE_ID:LOCxx标识符代码(基于AalbF5注释体系);T1_Mi_V-C与T5_Ca_V-C:为感染样本(V)与对照样本(C)的FPKM(每百万映射读段每千碱基转录本片段数)值(已额外加入1 FPKM以消除对数负值)的log2转换值,对应感染后1天(1 dpi,days post infection)的中肠组织,以及感染后5天(5 dpi)的虫体残体组织;GENE_NAME:根据注释结果和/或与已知蛋白的同源性确定的基因名称;在LRR工作表中:AEGYPTI_QUERY:用于搜索白纹伊蚊(Aedes albopictus)同源基因的埃及伊蚊(Aedes aegypti)基因标识符。每个工作表均详细概述了属于以下指定家族的免疫相关基因的关键特征,包括基因标识符、功能注释及表达谱:AMP(抗菌肽,antimicrobial peptides)、APOPTOSIS(细胞凋亡相关基因)、AUTOPHAGY(自噬相关基因)、CLIP、FREP、IMD、JAK-STAT、LIPID METABOLISM(脂质代谢相关基因)、LRR(富含亮氨酸重复序列)、OX-PEROXIDASE(过氧化物酶相关基因)、PGRP、PAF-CTL、PO-PPO、RNAi、SCVR、SRPN、TEP、TOLL-SPZ-REL、TRYPSINS(胰蛋白酶类基因)、UBI(泛素相关基因)、UBI_E1-ACT、UBI_E2-CONJ、UBI_E3-LIG、UBI_DE-UBI。(XLSX格式)
创建时间:
2025-10-03



