single-cell RNA-seq Data for "Multimodal Analysis of Cell Types in a Hypothalamic Node Controlling Social Behavior"
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https://data.mendeley.com/datasets/ypx3sw2f7c
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Single-cell RNA-seq (scRNA-seq) data collected from the ventral part of ventromedial hypothalamus (VMH) are listed below (after alignment process). You can find the detailed information for these data in the following paper, "Multimodal Analysis of Cell Types in a Hypothalamic Node Controlling Social Behavior" (doi: 10.1016/j.cell.2019.09.020). Briefly, we performed two independent scRNA-seq methods, SMART-seq & 10x (Chromium v2 chemistry), and all 10x data (each dataset was collected from 2-4 brains) were collected for Act-seq (behavior + scRNA-seq), whereas SMART-seq data included Retro-seq data (retrograde-labeling + scRNA-seq; see the detail in the metadata).
本数据集收录了经序列比对流程处理后的、取自腹内侧下丘脑(ventromedial hypothalamus, VMH)腹侧区域的单细胞RNA测序(single-cell RNA-sequencing, scRNA-seq)数据,详细信息可参阅以下论文:《调控社交行为的下丘脑节点中细胞类型的多模态分析》(DOI: 10.1016/j.cell.2019.09.020)。简要而言,本研究采用了两种独立的scRNA-seq实验方法:SMART-seq与10x(Chromium V2试剂盒化学法)。所有10x测序数据均采集自2-4个脑组织,且均为Act-seq(行为学检测+单细胞RNA测序)相关数据集;而SMART-seq数据集则包含Retro-seq数据(即结合逆行标记与单细胞RNA测序的实验,具体细节详见元数据)。
创建时间:
2020-03-05



