遇见数据集

Synthetic viral samples with DVGs

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Zenodo2022-04-04 更新2026-05-25 收录
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Two synthetic groups of fastq files with a known population of Defective Viral Genomes (DVGs) and the full genome virus. - 'sars216' dataset was generated from SARS-CoV-2 genome - 'tumv72' dataset was generated from Turnip Mosaic Virus. The composition of each file is defined in the composition file uploaded in the GitHub repository: https://github.com/MJmaolu/SyntheticSamplesWithDVGs. Simulated samples used to evaluate the performance of the DVGfinder tool (https://github.com/MJmaolu/DVGfinder).

本数据集包含两组合成fastq文件集,其中涵盖已知的缺陷病毒基因组(Defective Viral Genomes,DVGs)与完整基因组病毒种群。其中,'sars216'数据集源自SARS-CoV-2基因组,'tumv72'数据集源自芜菁花叶病毒(Turnip Mosaic Virus)。各文件的组成信息已在GitHub仓库https://github.com/MJmaolu/SyntheticSamplesWithDVGs上传的组成文件中予以明确。本模拟样本集用于评估DVGfinder工具的性能,该工具的开源仓库地址为https://github.com/MJmaolu/DVGfinder。

提供机构:
Zenodo
创建时间:
2022-04-04
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