PacBio Sequel genome sequencing of marine sponge-derived Aquimarina sp. Aq349

Here we report the complete genome sequence of Aquimarina sp. strain Aq349 isolated from Sarcotragus spinosulus off the coast of Algarve, South Portugal. The genome was sequenced using the 10-hour movie time on a PacBio Sequel (Pacific Biosciences) apparatus and assembled De Novo into three contigs with an N50 contig length of 4,0178,89bp. Genome assembly was accomplished using the SMRT Analysis Hierarchical Genome Assembly Process (HGAP; SMRT Link 9.0.0). This assembly submitted herewith is an alternative to the earlier assembly submitted for the same strain under the assembly accession number GCA_900299485.1 (sample accession: SAMEA104654171; study accession: PRJEB25019), which was based on Illumina sequencing technology.

本研究报道了从葡萄牙南部阿尔加维海岸外的多刺肉芝海绵（Sarcotragus spinosulus）中分离得到的海杆菌属（Aquimarina sp.）菌株Aq349的完整基因组序列。该基因组采用PacBio Sequel（太平洋生物科学公司，Pacific Biosciences）测序平台，以10小时测序运行时长完成测序，并经从头组装（De Novo）得到3个重叠群，其重叠群N50长度为4017889 bp。基因组组装通过SMRT分析分层基因组组装流程（HGAP；SMRT Link 9.0.0）完成。本次提交的组装结果为该菌株此前提交组装版本的替代方案，此前的组装版本基于Illumina测序技术，其组装登录号为GCA_900299485.1（样本登录号：SAMEA104654171；研究登录号：PRJEB25019）。