Additional file 2 of DNA methylation and expression profiles of placenta and umbilical cord blood reveal the characteristics of gestational diabetes mellitus patients and offspring
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Additional file2: Table S1.1 Quality control table of placenta RRBS data. Table S1.2 Quality control table of umbilical cord blood RRBS data. Table S1.3 Quality control table of placenta RNA-seq data. Table S1.4 Quality control table of umbilical cord blood RNA-seq data. Table S2 The 2779 differential methylation regions of placenta. Table S3 GO pathway enrichment of hyper-DMGs of placenta. Table S4 KEGG pathway enrichment of hyper-DMGs of placenta. Table S5 GO pathway enrichment of hypo-DMGs of placenta. Table S6 KEGG pathway enrichment of hypo-DMGs of placenta. Table S7 Up-regulated differentially expressed genes of placenta. Table S8 Down-regulated differentially expressed genes of placenta. Table S9 GO pathway enrichment of UP-DEGs of placenta. Table S10 KEGG pathway enrichment of UP-DEGs of placenta. Table S11 GO pathway enrichment of DN-DEGs of placenta. Table S12 KEGG pathway enrichment of DN-DEGs of placenta. Table S13 Positive enriched pathways of GSEA for placenta gene expression profile. Table S14 Negative enriched pathways of GSEA for placenta gene expression profile. Table S15 Up-regulated differentially expressed genes of umbilical cord blood. Table S16 Down-regulated differentially expressed genes of umbilical cord blood. Table S17 Positive enriched pathways of GSEA for umbilical cord blood gene expression profile. Table S18 Negative enriched pathways of GSEA for umbilical cord blood gene expression profile.
补充文件2:表S1.1 胎盘简化代表性亚硫酸氢盐测序(Reduced Representation Bisulfite Sequencing,RRBS)数据质控表;表S1.2 脐带血RRBS数据质控表;表S1.3 胎盘RNA测序(RNA-seq)数据质控表;表S1.4 脐带血RNA-seq数据质控表;表S2 胎盘的2779个差异甲基化区域;表S3 胎盘高甲基化差异甲基化基因(hyper-DMGs)的基因本体(Gene Ontology,GO)通路富集分析结果;表S4 胎盘高甲基化差异甲基化基因的京都基因与基因组百科全书(Kyoto Encyclopedia of Genes and Genomes,KEGG)通路富集分析结果;表S5 胎盘低甲基化差异甲基化基因(hypo-DMGs)的GO通路富集分析结果;表S6 胎盘低甲基化差异甲基化基因的KEGG通路富集分析结果;表S7 胎盘上调差异表达基因;表S8 胎盘下调差异表达基因;表S9 胎盘上调差异表达基因(UP-DEGs)的GO通路富集分析结果;表S10 胎盘上调差异表达基因的KEGG通路富集分析结果;表S11 胎盘下调差异表达基因(DN-DEGs)的GO通路富集分析结果;表S12 胎盘下调差异表达基因的KEGG通路富集分析结果;表S13 胎盘基因表达谱的基因集富集分析(Gene Set Enrichment Analysis,GSEA)阳性富集通路结果;表S14 胎盘基因表达谱的GSEA阴性富集通路结果;表S15 脐带血上调差异表达基因;表S16 脐带血下调差异表达基因;表S17 脐带血基因表达谱的GSEA阳性富集通路结果;表S18 脐带血基因表达谱的GSEA阴性富集通路结果
创建时间:
2022-05-23



