five

Whole-metagenome data on traditional beer-starter 'emao'

收藏
Figshare2019-07-30 更新2026-04-29 收录
下载链接:
https://figshare.com/articles/dataset/Whole-metagenome_data_on_traditional_beer-starter_emao_/8868689
下载链接
链接失效反馈
官方服务:
资源简介:
The amino acid sequences in fasta format were obtained from the whole-metagenome sequence of six pooled emao samples. The amino acid sequences assigned to KEGG Orthology (KO) genes were used for predicting metabolic modules in MAPLE system. The KOs assigned to ribosomal protein module (M91000) were extracted and used for species identification using GHOSTX homology search against NCBI-nr database. The RMA file containing ribosomal protein-based taxonomic information can be viewed using MEGAN program.

本研究从6份混合emao样本的全宏基因组序列中获取了FASTA格式的氨基酸序列。被注释为KEGG直系同源(KEGG Orthology,KO)基因的氨基酸序列,可用于MAPLE系统的代谢模块预测。针对被分配至核糖体蛋白模块(M91000)的KO条目,我们将其提取后,通过GHOSTX同源性搜索针对NCBI非冗余(NCBI-nr)数据库开展物种鉴定。包含基于核糖体蛋白的分类学信息的RMA文件,可通过MEGAN软件进行查看。
创建时间:
2019-07-30
5,000+
优质数据集
54 个
任务类型
进入经典数据集
二维码
社区交流群

面向社区/商业的数据集话题

二维码
科研交流群

面向高校/科研机构的开源数据集话题

数据驱动未来

携手共赢发展

商业合作