Elsafty_RBCs_for_Classification
收藏DataCite Commons2024-04-22 更新2024-08-19 收录
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This Elsafty_RBCs_for_Classification dataset is systematically structured into three primary folders: "Cropped images”, "Masks”, and "Segmented images”. Within each of these primary folders, there are nine subfolders, meticulously dedicated to each RBCs class, encompassing the following counts of cells: "Angled cells: 24,187", "Borderline ovalocytes: 35,540”, "Burr cells: 8,948”, "Fragmented RBCs: 7,186”, "Ovalocytes: 55,073”, "Rounded RBCs: 46,338”, "Teardrops: 16,298”, "Three-overlapping RBCs: 15,577”, and "Two-overlapping RBCs: 31,360”. Each of the total 240,507 cells is represented by its own cropped image, mask, and segmented image. Samples for every class were collected from each slide/patient. The naming scheme for the cropped image, mask, and segmented image of every cell adheres to a consistent format, starting with the slide/patient number, followed by the unique patch/field number, and concluding with the (XYWH) coordination on the patch. All these images are conveniently stored in the lossless ".PNG" format.The presence of fragmented RBCs or teardrop-shaped RBCs is medically significant as it is commonly associated with serious medical conditions. Fragmented RBCs are defined as RBCs that are smaller than half the average normal/rounded RBCs size and/or irregularly shaped fragments with sharp, angular, or jagged edges. Identifying these cells is the most reliable indicator to confirm the diagnosis of diseases such as hemolytic anemias, thrombotic thrombocytopenic purpura (TTP), and disseminated intravascular coagulation (DIC). However, reporting fragmented RBCs in TTP and DIC can be a challenge due to their infrequency in hematology labs; furthermore, the cutoff for significant presence in these two serious diseases is just above 1–1.5% of the total RBCs, increasing the risk of overlooking them. Crucially, in cases of critical thrombocytopenia where the platelet count is less than 20 K/µL, platelet transfusion may be necessary, but this intervention can be life-threatening in TTP and DIC. Therefore, identifying and counting fragmented RBCs could be critical for the accurate diagnosis and management of patients with associated medical conditions.Increased teardrop-shaped RBCs above 2–4% in adults can be indicative of bone marrow fibrosis caused by bone marrow cancers, and in non-cancerous conditions, rushed erythropoiesis/production of blood to compensate for severe anemia is the differential diagnosis. Currently, manual or DL-based visual examination is the only way to identify teardrop-shaped RBCs. It is essential to differentiate between true teardrop-shaped RBCs, which have a single blunt protrusion, and false ones that have sharp surface projections without necks or have more than one blunt protrusion. Mechanical stress during blood smear preparation often leads to the formation of false teardrop shapes, primarily at the outer edges of the blood film.Ovalocytes are a type of RBCs that have an abnormal oval shape. The presence of ovalocytes exceeding 5–10% of the total RBCs is associated with almost all types of anemia or erythrocytosis. They may display elongation and/or a pear shape, but without any blunt or sharp surface protrusions. Occasionally, they can also appear in normal blood smears due to mechanical deformation during preparation, though at a low frequency.The burr cells have uneven surfaces with several small notches and protrusions. Likewise, no technological substitute currently exists for the visual recognition of burr cells, which tend to elevate under conditions of dehydration, such as in cases of renal failure or dehydrated neonates. Alternatively, in situations lacking medical justification, the presence of burr cells may arise due to the extended drying of smears during the manual staining procedure.
本Elsafty_RBCs_for_Classification红细胞(Red Blood Cells,RBCs)分类数据集采用系统化架构,包含三个核心文件夹:"裁剪图像(Cropped images)"、"掩码(Masks)"与"分割图像(Segmented images)"。每个核心文件夹下均设有9个子文件夹,精准对应每一类红细胞,各类细胞的数量如下:角形红细胞(Angled cells):24,187个、临界卵圆形红细胞(Borderline ovalocytes):35,540个、刺状红细胞(Burr cells):8,948个、破碎红细胞(Fragmented RBCs):7,186个、卵圆形红细胞(Ovalocytes):55,073个、圆形红细胞(Rounded RBCs):46,338个、泪滴形红细胞(Teardrops):16,298个、三重重叠红细胞(Three-overlapping RBCs):15,577个、双重重叠红细胞(Two-overlapping RBCs):31,360个。总计240,507个细胞,每个细胞均配有专属的裁剪图像、掩码与分割图像。每一类红细胞样本均取自不同的血涂片/患者。
每个细胞的裁剪图像、掩码及分割图像的命名规则统一,格式为:血涂片/患者编号→唯一图像块/视野编号→该视野内的(XYWH)坐标。所有图像均采用无损PNG(.PNG)格式存储。
破碎红细胞或泪滴形红细胞的检出具有重要临床价值,通常与多种重症疾病相关。破碎红细胞的定义为:尺寸小于正常/圆形红细胞平均尺寸一半的红细胞,或形状不规则、带有尖锐、棱角或锯齿状边缘的碎片状红细胞。识别此类细胞是确诊溶血性贫血、血栓性血小板减少性紫癜(TTP)及弥散性血管内凝血(DIC)等疾病的最可靠指标。然而,由于此类细胞在血液学实验室中检出率较低,在TTP与DIC病例中报告破碎红细胞颇具挑战;此外,这两种重症疾病中具有临床意义的破碎红细胞占比阈值仅为总红细胞的1%~1.5%以上,进一步提升了漏检风险。
尤为关键的是,当患者出现血小板计数低于20×10^9/L的重症血小板减少症时,可能需要进行血小板输注,但该干预措施在TTP与DIC患者中可能会危及生命。因此,识别并计数破碎红细胞对于相关疾病患者的精准诊断与临床管理至关重要。
成人外周血中泪滴形红细胞占比超过2%~4%,可提示骨髓恶性肿瘤引发的骨髓纤维化;在非恶性疾病中,则需鉴别是否为因重度贫血而代偿性红细胞生成加速所致。目前,人工目视检查或基于深度学习(Deep Learning,DL)的视觉检测是识别泪滴形红细胞的唯一手段。需严格区分真性泪滴形红细胞与假性泪滴形红细胞:前者仅带有单一钝性突起,后者则表现为无颈部的尖锐表面突起,或存在多个钝性突起。血涂片制备过程中的机械应力常可诱发假性泪滴形红细胞的形成,此类伪影多出现于血膜的边缘区域。
卵圆形红细胞是一类形态异常的椭圆形红细胞。当其占总红细胞比例超过5%~10%时,几乎与各类贫血或红细胞增多症相关。此类细胞可呈伸长形态或梨形,但表面无任何钝性或尖锐突起。偶尔,因制备过程中的机械形变,正常血涂片也可出现少量卵圆形红细胞,但检出率较低。
刺状红细胞的表面凹凸不平,带有多个小型切迹与突起。目前同样无技术手段可替代刺状红细胞的目视识别:此类细胞在脱水状态下(如肾衰竭或脱水新生儿病例)的检出率会升高;而在无明确医学指征的情况下,手工染色过程中血涂片干燥时间过长也可导致刺状红细胞的出现。
提供机构:
figshare
创建时间:
2024-04-14



