Additional file 1 of A comparative gene co-expression analysis using self-organizing maps on two congener filmy ferns identifies specific desiccation tolerance mechanisms associated to their microhabitat preference

Additional file 1: Table S1. Statistics for RNA-seq libraries sequencing of H. caudiculatum (Hca) and H. dentatum (Hdent) for each of their hydrated states. Statistics shows total number of reads (No. of reads), high quality reads that passed quality control (No. of HQ reads), reads that were mapped to transcriptomes (No. of mapped reads) and their percentage of mapping (Mapping rate) Table S2. Assembly statistics for H. caudiculatum and H. dentatum transcriptomes before (raw) and after refinement (filtered). The total number of transcripts (No. transcripts), number of trinity components (Trinity components), putative transcriptome in mega base pairs (Transcriptome Size), basic statistics on transcript lengths (Average, median, minimum and maximum) and assembly quality as N50 (N50) Table S3. Blast results for H. caudiculatum and H. dentatum against SwissProt database. Table shows the counts distribution per sequence size (Size range) of blast hit (Blast Hit) and missing hits (Unknow) and the cumulative percentages (Cums %)

附加文件1：表S1。尾囊壶菌（H. caudiculatum，缩写Hca）与齿状壶菌（H. dentatum，缩写Hdent）不同水合状态下的RNA测序（RNA-seq）文库测序统计信息。统计指标包括：读段总数（No. of reads）、通过质量控制的高质量读段（No. of HQ reads）、比对至转录组的读段（No. of mapped reads）及其比对百分比（Mapping rate）。
表S2。尾囊壶菌与齿状壶菌转录组在组装前（原始数据）及优化后（过滤后）的组装统计信息。统计内容包括：转录本总数（No. transcripts）、Trinity组件数（Trinity components）、以百万碱基对为单位的推定转录组大小（Transcriptome Size）、转录本长度的基础统计量（平均值、中位数、最小值与最大值）以及组装质量指标N50（N50）。
表S3。尾囊壶菌与齿状壶菌针对SwissProt数据库的BLAST比对结果。该表展示了按序列长度区间（Size range）划分的比对成功序列（Blast Hit）与无比对结果序列（Unknown）的计数分布，及其累计百分比（Cums %）。