Tempelton's Tests files

This zipped folder contains all files used for the Templeton's test. This folder is organised in subfolders, whereas "1 - Pasimony Analysis Input files" contains the character-taxon matrix (in PAUP format), the molecular backbone constraint, and constraint files for all 20 alternative hypotheses tested. "2 - Parsimony Analysis Results" contains consensus tree files and MPT tree files for all analyses. "3- Symmetric Distance Analysis Input files" contains nexus files used to compute symmetric distances. "4 - Symmetric Distance Analysis Results" contains the symmetric distance matrices for all constraints as text-files. "5 - Tree selection for Templeton" contains the R code used to select tree-pairs for Templeton's tests. "6 - Templeton's Test Input files" contains nexus files in which selected trees to be compared are included. Files are provided for each constraint for maximum and minimum symmetric distance tree pairs. "7 - Templeton's Test Results" are PAUP log-files that include the test results.

本压缩文件夹包含了Templeton检验所用的全部文件。该文件夹按子文件夹进行组织："1 - 简约分析输入文件"内含以PAUP格式存储的性状-分类群矩阵、分子骨架约束文件，以及用于检验全部20个备选假说的约束文件。"2 - 简约分析结果"文件夹内含所有分析的合意树文件与最简约树（MPT）文件。"3 - 对称距离分析输入文件"内含用于计算对称距离的NEXUS格式文件。"4 - 对称距离分析结果"文件夹内含以文本文件形式存储的所有约束条件对应的对称距离矩阵。"5 - Templeton检验树选择"文件夹内含用于为Templeton检验选取树对的R代码。"6 - Templeton检验输入文件"内含纳入待比较选定树的NEXUS格式文件，涵盖所有约束条件下最大对称距离与最小对称距离的树对文件。"7 - Templeton检验结果"为包含检验结果的PAUP日志文件。