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Lutjanus lemniscatus (Darktail Snapper) genome, fLutLem1, haplotype 2. Lutjanus lemniscatus

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NIAID Data Ecosystem2026-05-02 收录
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https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1228106
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The Darktail Snapper (Lutjanus lemniscatus) is found in the Indo-West Pacific, from southern India and Sri Lanka to the Philippines, New Guinea, and Australia. In Australia, it ranges from Shark Bay in Western Australia to at least Cooktown in Queensland, possibly extending south to Noosa. This assembly is based on PacBio HiFi long reads, Dovetail Omni-C libraries and Illumina short reads. Data was generated at the Minderoo OceanOmics Centre at the University of Western Australia and assembled in house using a custom pipeline (https://github.com/MinderooFoundation) that follows Vertebrate Genomes Project workflows (https://vertebrategenomesproject.org/). The raw data and version 1 assembly are made available and should be credited in accordance with Ocean Genomes data use and sharing policies URL: https://www.minderoo.org/oceanomics. To discuss interim access, please contact oceangenomes@uwa.edu.au.

黑尾笛鲷(Darktail Snapper,Lutjanus lemniscatus)分布于印度-西太平洋海域,其分布范围涵盖印度南部、斯里兰卡,东至菲律宾、新几内亚及澳大利亚。在澳大利亚境内,其分布西起西澳大利亚州的鲨鱼湾,至少延伸至昆士兰州的库克敦,推测可向南拓展至努萨。本次基因组组装采用PacBio HiFi长读长测序数据(PacBio HiFi)、Dovetail Omni-C文库(Dovetail Omni-C)以及Illumina短读长测序数据(Illumina)。测序数据由西澳大利亚大学敏德罗罗海洋组学中心(Minderoo OceanOmics Centre)生成,并依托遵循脊椎动物基因组计划(Vertebrate Genomes Project)流程的自研分析流水线(https://github.com/MinderooFoundation)完成内部组装。原始测序数据与版本1的基因组组装结果已对外公开共享,使用时需遵照Ocean Genomes数据使用与共享政策,相关说明详见链接:https://www.minderoo.org/oceanomics。如需洽谈临时访问权限,请发送邮件至oceangenomes@uwa.edu.au。
创建时间:
2025-02-25
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