Not All eDNA Is Equal: Particle Size, Marker, and Medium Drive Signal Structure Across Air and Aquatic Systems

Code repository: - https://github.com/QichaoTan/Air_eDNA_Project/tree/main/Air%20eDNA%20project Included files: - `asv/` - `Chloroplast_lulu_curated.txt` - `Microbe_lulu_curated.txt` - `Mammal_lulu_curated.txt` - `Vertebrate_lulu_curated.txt` - `taxonomy/` - `chloroplast.csv` - `microbe.csv` - `mammal.csv` - `vertebrate.csv` - `masterfile.csv` - `metadata/` - `sample_metadata.csv` - `ddpcr/` - `ddPCR.xlsx` Excluded from this bundle: - Derived plots and summary tables - Supplementary figures and tables - Intermediate analysis outputs - Map source data - Code - Lane barcode and QC forms that are not required for the core raw-data rerun代码仓库： - https://github.com/QichaoTan/Air_eDNA_Project/tree/main/Air%20eDNA%20project 包含文件： - `asv/` - `Chloroplast_lulu_curated.txt`：叶绿体（Chloroplast）LULU整理文件 - `Microbe_lulu_curated.txt`：微生物（Microbe）LULU整理文件 - `Mammal_lulu_curated.txt`：哺乳动物（Mammal）LULU整理文件 - `Vertebrate_lulu_curated.txt`：脊椎动物（Vertebrate）LULU整理文件 - `taxonomy/`（分类学（taxonomy）目录） - `chloroplast.csv`：叶绿体（Chloroplast）分类表 - `microbe.csv`：微生物（Microbe）分类表 - `mammal.csv`：哺乳动物（Mammal）分类表 - `vertebrate.csv`：脊椎动物（Vertebrate）分类表 - `masterfile.csv`：总整合文件 - `metadata/`（元数据（metadata）目录） - `sample_metadata.csv`：样本元数据（sample_metadata.csv） - `ddpcr/`（数字PCR（ddPCR）目录） - `ddPCR.xlsx`：数字PCR（ddPCR）实验数据文件 本数据包未包含的内容： - 衍生绘图与汇总统计表 - 补充附图与附表 - 分析中间产出文件 - 地图源数据 - 代码脚本 - 核心原始数据重跑无需用到的泳道条码与质量控制（QC）表单