Single cell RNA-seq analysis of melanoma. Homo sapiens
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https://www.ncbi.nlm.nih.gov/bioproject/PRJNA292832
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To understand the diversity of expression states within melanoma tumors, we obtained freshly resected samples, dissagregated the samples, sorted into single cells and profiled them by single-cell RNA-seq. Overall design: Tumors were disaggregated, sorted into single cells, and profiled by Smart-seq2. *Raw data files absent for samples GSM1851356 and GSM1851494.* **Submitter declares reads will be made available through dbGaP.** Please note that the processed data file (melanoma_single_cell_revised_v2.txt) contains two additional sample characteristis ("classification (based on inferred cnvs)" and "cell types for non-malignant cells").
为探究黑色素瘤肿瘤内部表达状态的多样性,我们获取了新鲜切除的肿瘤样本,对样本进行解离处理,分选得到单细胞,并通过单细胞RNA测序(single-cell RNA-seq)对其开展转录组谱分析。整体实验设计:将肿瘤组织解离后分选得到单细胞,通过Smart-seq2技术完成转录组谱分析。* 样本GSM1851356与GSM1851494的原始数据文件缺失。** 数据提交者声明,其测序读段将通过dbGaP数据库公开。请注意,处理后的数据文件melanoma_single_cell_revised_v2.txt包含两项额外的样本特征:“基于推断拷贝数变异(copy number variations, CNVs)的分类”以及“非恶性细胞的细胞类型”。
创建时间:
2015-08-13



