GTDB release89
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<pre>GTDB R04-RS89 Release date: June 17th, 2019 GTDB R04-RS89 contains 23,458 bacterial and 1,248 archaeal species clusters which span 145,904 genomes. </pre> <pre>Additional information ---------------------- Please consult the following GTDB publications for additional information: Parks, D. H., et al. (2018). A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life. Nature Biotechnology, 36: 996-1004. Parks DH, et al. (2019). Selection of representative genomes for 24,706 bacterial and archaeal species clusters provide a complete genome-based taxonomy. bioRxiv: https://doi.org/10.1101/771964 Chaumeil P-A, et al. (2019). GTDB-Tk: a toolkit to classify genomes with the Genome Taxonomy Database. Bioinformatics, btz848: https://doi.org/10.1093/bioinformatics/btz848. </pre>
基因组分类数据库(Genome Taxonomy Database, GTDB)R04-RS89 发布日期:2019年6月17日。该数据集包含23458个细菌物种簇与1248个古菌物种簇,涵盖145904个基因组。 附加信息 ---------------------- 如需获取更多相关信息,请参阅以下GTDB相关文献: Parks, D. H. 等 (2018). 基于基因组系统发育的标准化细菌分类学显著重塑生命之树. 《自然·生物技术》, 36: 996-1004. Parks DH 等 (2019). 筛选24706个细菌与古菌物种簇的代表性基因组以构建完整的基因组分类学体系. bioRxiv预印本: https://doi.org/10.1101/771964 Chaumeil P-A 等 (2019). GTDB-Tk:一款基于基因组分类数据库(Genome Taxonomy Database, GTDB)实现基因组分类的工具包. 《生物信息学》, btz848: https://doi.org/10.1093/bioinformatics/btz848.



