Localized Protein Quantification of Blood Brain Barrier Vasculature in Brightfield IHC Images

In this paper, we present an objective method for locally quantifying proteins in blood brain barrier (BBB) vasculature using standard immunohistochemistry (IHC) techniques and bright-field microscopy. Images from the hippocampal region at the BBB are acquired using bright-field microscopy and subjected to our immunohistochemistry quantification (IQ) algorithm which is designed to automatically identify and segment microvessels containing the protein glucose transporter 1 (GLUT1). Gabor filtering and k-means clustering are employed to isolate potential vascular structures within cryopsectioned slabs of the hippocampus, which are subsequently subjected to feature extraction followed by classification via decision forest. The false positive rate (FPR) of microvessel classification is characterized using synthetic and non-synthetic IHC image data for image entropies ranging between 3 and 8 bits. The average FPR for synthetic and non-synthetic IHC image data was found to be 5.48% and 5.04%, respectively.

本研究提出一种基于标准免疫组织化学（immunohistochemistry, IHC）技术与明场显微镜的客观方法，用于对血脑屏障（blood brain barrier, BBB）脉管系统内的蛋白质进行定量分析。研究采集了血脑屏障处海马区的明场显微镜图像，并将其输入至自主研发的免疫组化定量（immunohistochemistry quantification, IQ）算法中，该算法可自动识别并分割表达葡萄糖转运蛋白1（glucose transporter 1, GLUT1）的微血管。本研究采用Gabor滤波与k均值聚类，从海马组织冰冻切片标本中分离潜在脉管结构，随后对其开展特征提取，并通过决策森林完成分类。研究针对图像熵介于3至8比特的合成与非合成免疫组化图像数据，对微血管分类的假阳性率（false positive rate, FPR）进行了表征。实验结果表明，合成与非合成免疫组化图像数据的平均假阳性率分别为5.48%与5.04%。