Data_For_Kovachetal2013_EvolApps

This file contains the data used in "Temporal patterns of genetic variation in a salmon population undergoing rapid change in migration timing". The data are organized based on the methods used to analyze them and year. The first three sheets are the data used for estimating the effective population size - the files are in ONeSAMP format. The next three files are the data sets used to test for autocorrelation (GENALEX) and population structure (STRUCTURE) - the files are in GENALEX format. The next sheet "Allozymes" contains the raw allele frequency data that were used to calculate G"st between early and late migrating fish in 1979-1983. Each row is a different locus, the first column is the number of genotypes for each locus, and the next several columns are the observed allele frequencies at that locus. The next three sheets are the data files used to calculate G"st for the microsatellite data from 1993, 2001, 2009. The final file contain the data that were used to test for genetic homogeneity between the different quartiles of the migration timing distribution.

本数据集包含论文《洄游时间正经历快速变化的鲑鱼种群遗传变异的时间模式》（Temporal patterns of genetic variation in a salmon population undergoing rapid change in migration timing）中所使用的全部数据。本数据集按照分析方法与采集年份进行组织编排。前三个工作表为用于估算有效种群大小（effective population size）的数据，文件格式为ONeSAMP格式。后续三个数据集分别用于开展自相关检验（采用GENALEX软件）与种群结构分析（采用STRUCTURE软件），所有文件均采用GENALEX格式。下一个名为“同种异型酶（Allozymes）”的工作表包含原始等位基因频率（allele frequency）数据，这些数据被用于计算1979年至1983年间早洄游与晚洄游鲑鱼个体间的G"st值。该工作表中每一行代表一个不同的基因座（locus），第一列为每个基因座的基因型数量，后续若干列则为该基因座上观测到的等位基因频率。后续三个工作表为用于计算1993年、2001年及2009年微卫星（microsatellite）数据G"st值的数据集文件。最后一个工作表包含用于检验洄游时间分布不同四分位数区间间遗传同质性（genetic homogeneity）的数据集。