Twist Solid GMS560 v0.6.1 panel of normals
收藏DataCite Commons2025-01-15 更新2024-07-13 收录
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https://figshare.scilifelab.se/articles/dataset/Twist_Solid_GMS560_v0_6_1_panel_of_normals/23180981
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资源简介:
The data included here are part of a collection of different types of reference data used in the bioinformatic analysis pipeline called Twist Solid GMS560. The pipeline is based on the Hydra-genetics framework and analyses NGS short read data from the GMS560 Twist panel which is used on solid cancer samples.
The data in this specific item include panel of normals and artifact filer files generated for the Twist GMS560 panel. Panel of normals and artifacts are specific to panel used and sequencing machine. Programs using these files include MSIsensor-Pro, GATK CNV, CNVkit, SVDB, PureCN, and small variant filtering.
本数据集收录的数据,属于名为Twist Solid GMS560的生物信息学分析流程所使用的多类型参考数据集集合的一部分。该流程基于Hydra-genetics框架构建,用于分析针对实体瘤样本的GMS560 Twist测序面板产出的下一代测序(Next-Generation Sequencing, NGS)短读长数据。
本特定数据项所包含的数据,为针对Twist GMS560测序面板生成的正常对照面板(Panel of Normals)与伪影过滤文件。正常对照面板及伪影文件与所用测序面板及测序仪一一对应。可调用此类文件的分析工具包括MSIsensor-Pro、GATK CNV、CNVkit、SVDB、PureCN以及小变异过滤流程。
提供机构:
Uppsala universitet
创建时间:
2023-06-12



