Data For Matlab Package Locfish To Simulate Realistic 3D Smfish Images
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Different data-sets needed by the Matlab package locFISH. locFISH allows the simulation and analysis of realistic single molecule FISH (smFISH) images. <strong>data_simulation.zip</strong><br> Contains all necessary data to simulated smFISH images. Specifically, the zip archive contains a library of 3D cell shapes, realistic imaging background, and a simulated PSF (Point Spread Function). <strong>GAPDH.zip</strong><br> Contains the smFISH data of GAPDH and the corresponding analysis results, which were used to create the library of cell shapes provided in data_simulation.zip For more details on these data and how do to use them, please consult the detailed user-manual provided with <strong>locFISH</strong>, available at https://bitbucket.org/muellerflorian/fish_quant
locFISH 这款 Matlab 工具包所需的各类数据集。locFISH 可实现单分子荧光原位杂交(single molecule FISH,smFISH)写实图像的模拟与分析。 **data_simulation.zip**:包含模拟smFISH图像所需的全部配套数据。具体而言,该压缩包内含三维细胞形态库、写实成像背景以及模拟的点扩散函数(Point Spread Function,PSF)。 **GAPDH.zip**:包含GAPDH的smFISH实验数据及其对应分析结果,该数据集曾用于构建data_simulation.zip中提供的细胞形态库。 如需了解这些数据集的更多细节及使用方法,请查阅随locFISH一同提供的详细用户手册,获取地址为:https://bitbucket.org/muellerflorian/fish_quant



