five

JET, iJET, and ET evaluation on chain 1n5y:A.

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https://figshare.com/articles/dataset/_JET_iJET_and_ET_evaluation_on_chain_1n5y_A_/582158
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Predictions for DNA transferase chain 1n5y:A when 1000 or 5000 sequences are retrieved using PSI-BLAST. Best predictions are obtained with iJET (in bold) run on 5000 retrieved sequences. JET results are improved when physical-chemical properties are taken into account (compare JET-cons with JET-cons+pc). For different classes of sequence identity we report the number of sequences collected in each class after filtering. The 478 sequences retrieved by ET with BLAST have sequence identities in the range 90–96%.

针对1n5y:A链DNA转移酶,当使用位置特异性迭代基本局部比对搜索工具(PSI-BLAST)检索得到1000条或5000条序列时的预测结果。基于5000条检索序列运行的iJET方法(以粗体标注)可获得最优预测结果。当引入理化性质进行计算时,JET方法的预测性能得到提升(可对比JET-cons与JET-cons+pc的结果)。针对不同序列同一性类别,我们统计了过滤后每一类中收集到的序列数量。通过ET结合BLAST检索得到的478条序列,其序列同一性处于90%至96%的区间内。
创建时间:
2009-01-23
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