Data generated for project "Comparative phylogenomic and niche differentiation of Himalopsyche"

This folder includes:Variants files of the four focal species after filtering;Input and output files for genotype likelihoods, linkage pruning, PCA, and NGSadmix estimates of the four focal species;Output files of genomewide-diversity, inbreeding-coefficient, pairwise-Fst between populations and population groups;Output files of psmc analyses;Output files of treemix analyses;Input and output files of dadi analyses.

本文件夹包含以下内容：经过滤后的4个目标物种的变异位点文件；4个目标物种的基因型似然值（genotype likelihoods）计算、连锁筛选（linkage pruning）、主成分分析（PCA）以及NGSadmix群体结构推断所需的输入与输出文件；全基因组多样性、近交系数（inbreeding-coefficient）、群体间及群体组间成对Fst的输出文件；PSMC分析的输出文件；treemix群体历史推断分析的输出文件；dadi群体遗传学分析的输入与输出文件。