Pond water SIP fraction microbial communities from Walnut Creek, CA, United States - JGIPond_D_60pct_10ng_1_1.7459 metagenome
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https://www.ncbi.nlm.nih.gov/sra/SRP399140
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资源简介:
SIP metagenome fraction of pond sample from Joint Genome Institute, Walnut Creek spiked with Pseudomonas putida & Escherichia coli bacterial isolates (for each isolate 10ng of DNA labeled at 60pct with C13 were added); replicate number 1. This fraction has a SIP fraction number 5 and DNA density of 1.7459 g/uL. This is part of a larger study to identify the limit of detection of JGI SIP metagenomics pipeline.
来自联合基因组研究所(Joint Genome Institute)沃尔纳特溪池塘样本的稳定同位素探针(Stable Isotope Probing,简称SIP)宏基因组组分,掺入了恶臭假单胞菌(Pseudomonas putida)与大肠杆菌(Escherichia coli)菌株分离物;针对每株分离物,均添加了10ng经60%比例碳13(Carbon-13, C13)标记的DNA,该样本的重复编号为1。该组分的SIP编号为5,DNA密度为1.7459 g/μL。本样本属于一项旨在验证JGI SIP宏基因组分析流程检测限的大型研究的组成部分。
创建时间:
2022-09-26



