Additional file 1: of Genome-wide identification, molecular evolution, and expression analysis of auxin response factor (ARF) gene family in Brachypodium distachyon L

Table S1. The nomenclature, characteristics of ARF genes and their deduced proteins in seven representative plant species. Table S2. The parameters of conserved B3 and Auxin_resp domains from SMART and Pfam. Table S3 Sequences of primers for subcellular localization. Table S4. Amino acid sites of functional divergence between groups of ARFs subfamily. Table S5. Adaptive selection analysis of ARF genes using site-specific models. Table S6. cis-element analysis of 1500â bp nucleotide sequences data upstream of the translation initiation codon of ARF genes. Table S7. Sequences of primers for qRT-PCR. (XLSX 262â kb)

表S1 七种代表性植物中ARF（Auxin Response Factor）基因及其推定蛋白的命名规范与特征
表S2 来自SMART与Pfam数据库的保守B3结构域及Auxin_resp结构域参数
表S3 亚细胞定位实验所用引物序列
表S4 ARF基因亚家族各组间功能分化的氨基酸位点
表S5 采用位点特异性模型开展的ARF基因适应性选择分析
表S6 ARF基因翻译起始密码子上游1500 bp核苷酸序列的顺式作用元件分析
表S7 实时定量逆转录聚合酶链式反应（qRT-PCR）所用引物序列
（XLSX格式，文件大小262 KB）