Additional file 3 of Sequenced-based GWAS for linear classification traits in Belgian Blue beef cattle reveals new coding variants in genes regulating body size in mammals
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Additional file 3: Tables S11–S31. Correlations and Credible sets. Table S11. Correlations among association levels in the QTL regions. Table S12–S22. Credible sets obtained with single and multiple trait approaches for the 11 QTL regions. Table S23. Variants from credible sets detected as eQTL in the Cattle GTEx study. Table S24–S28. Credible sets obtained with single and multiple trait approaches for the conditional mapping. Table S29. Effects of candidate variants estimated jointly. Table S30. Percentage of genetic variance associated with identified candidate variants. Table S31. Frequency of alleles of the candidate variants in other breeds.
附加文件3:表S11至S31。相关性与可信集(Credible sets)。表S11:数量性状基因座(Quantitative Trait Locus)区域内关联水平间的相关性。表S12至S22:针对11个QTL区域,采用单性状与多性状方法构建的可信集。表S23:在牛GTEx(Cattle Genotype-Tissue Expression)研究中被鉴定为eQTL(expression Quantitative Trait Locus)的可信集变异体。表S24至S28:针对条件定位分析,采用单性状与多性状方法构建的可信集。表S29:联合估算的候选变异体效应。表S30:与已鉴定候选变异体相关的遗传方差占比。表S31:其他品种中候选变异体的等位基因频率。
提供机构:
Yuan, Can; Coppieters, Wouter; Georges, Michel; Takeda, Haruko; Gori, Ann-Stephan; Druet, Tom; Moreira, Gabriel C. M.; Charlier, Carole; Gualdrón Duarte, José Luis
创建时间:
2024-08-14



