Additional file 7 of Whole-genome genotyping and resequencing reveal the association of a deletion in the complex interferon alpha gene cluster with hypothyroidism in dogs

Additional file 7: Table S1. Table showing the genotypes of the GWA analysis top SNP (CFA11: 40,777,312), average coverage and proportions of reads mapping to Canfam3.1 for the sequenced HC and LC case (highlighted in dark and light red) and HC and LC control (highlighted in dark and light blue) samples. HC: high coverage; LC: low coverage.

附加文件7：表S1。该表展示了全基因组关联分析（Genome-Wide Association Study, GWA）中排名靠前的单核苷酸多态性（Single Nucleotide Polymorphism, SNP，CFA11: 40,777,312）的基因型，以及测序获得的高覆盖度（high coverage, HC）与低覆盖度（low coverage, LC）病例样本（分别以深、浅红色标注）、高覆盖度与低覆盖度对照样本（分别以深、浅蓝色标注）的平均测序深度和比对至犬参考基因组Canfam3.1的测序读段（reads）比例。其中，HC代表高覆盖度，LC代表低覆盖度。