Additional file 2 of Mutation of amphioxus Pdx and Cdx demonstrates conserved roles for ParaHox genes in gut, anus and tail patterning

Additional file 2: Supplementary Data. Gene expression differences between mutant and wild type amphioxus inferred from mapping RNAseq reads to superTranscriptome. Contig identity, expression fold change, FPKM, raw read counts and DNA sequence are given for Cdx gene mutation analysis (42 h dataset; 34 h and 42 h datasets) and Pdx mutation analysis. Data underlying identification of gut-enriched genes in B. lanceolatum, inference of inferred B. floridae orthologues, presence in Pdx and Cdx differential gene expression datasets and putative gene identities.

附加文件2：补充数据。本数据集涵盖通过将RNA测序（RNA-seq）读数比对至超级转录组（superTranscriptome）所推断得到的突变型与野生型文昌鱼的基因表达差异。针对Cdx基因突变分析（42小时数据集；34小时与42小时数据集）以及Pdx基因突变分析，本数据提供了重叠群一致性、表达倍数变化、FPKM（每百万映射读取的转录本每千碱基片段数）、原始读数计数与DNA序列信息。本数据同时包含作为以下各项基础的相关信息：对B. lanceolatum中肠道富集基因的鉴定、对B. floridae直同源基因的推断、相关基因在Pdx与Cdx差异基因表达数据集中的存在情况，以及推定的基因注释信息。