Additional file 14 of FixNCut: single-cell genomics through reversible tissue fixation and dissociation

Additional file 14: Table 13. This table contains the results of gene set enrichment analysis (GSEA) for fixed versus fresh human colon biopsies comparison by cell population. The test was performed with the fgsea package using multiple gene sets from MSigDB. Gene sets were included only if they contained between 10-300 genes, and obtained results were considered with a FDR adjusted p-value < 0.05, only if more than 5 genes were overlapping with the gene set and represented more than 15% of the gene set (see Methods).

附加文件14：表13。该表收录了按细胞群划分的固定与新鲜人体结肠活检组织对比分析的基因集富集分析（Gene Set Enrichment Analysis，GSEA）结果。本分析采用fgsea软件包，基于分子特征数据库（Molecular Signatures Database，MSigDB）中的多组基因集完成。纳入分析的基因集需满足包含10~300个基因的条件；最终有效结果需同时符合以下标准：经错误发现率（False Discovery Rate，FDR）校正的P值小于0.05，与对应基因集存在重叠的基因数超过5个，且重叠基因占该基因集的比例大于15%（详见方法部分）。