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SNP calling counts from individual and pool sequencing data.

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Figshare2025-06-25 更新2026-04-28 收录
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https://figshare.com/articles/dataset/SNP_calling_counts_from_individual_and_pool_sequencing_data_/29407135
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资源简介:
Comprehensive count matrix for SNP analysis in Bromus auleticus genotypes, detailing metrics for both individual and pooled data sets. It includes 130,261 markers with their allele identification, call rates, homozygosity and heterozygosity frequencies, polymorphism information content (PIC), and reproducibility. The table contains 296 samples, consisting of 58 individual samples from accessions 50 and 87, and 60 individual samples from the remaining accessions. The remaining 100 samples represent pooled data, 20 for each accession. https://doi.org/10.6084/m9.figshare.28225550.v1. (ZIP)

本数据集为用于细穗雀麦(*Bromus auleticus*)基因型单核苷酸多态性(Single Nucleotide Polymorphism, SNP)分析的综合计数矩阵,详细记载了单样本与混合样本数据集的各项统计指标。该矩阵共包含130261个标记位点,涵盖各标记的等位基因鉴定结果、分型检出率、纯合性频率、杂合性频率、多态性信息含量(Polymorphism Information Content, PIC)以及可重复性等信息。本数据集总计296份样本:其中58份为来自种质材料50与87的单样本,60份为来自其余种质材料的单样本;剩余100份为混合样本,每份种质对应20份混合样本。相关数据集的DOI标识为:10.6084/m9.figshare.28225550.v1,本文件为ZIP压缩包格式。
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2025-06-25
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