Additional file 1: Table S1. of Oral immune priming with Bacillus thuringiensis induces a shift in the gene expression of Tribolium castaneum larvae
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https://springernature.figshare.com/articles/dataset/Additional_file_1_Table_S1_of_Oral_immune_priming_with_Bacillus_thuringiensis_induces_a_shift_in_the_gene_expression_of_Tribolium_castaneum_larvae/4923734
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Lists of all differentially expressed genes in the different priming-challenge treatments (compared to the fully naïve control; xlsx file). Relevant columns include the following: sample_1 and sample_2 – treatment groups being compared; Normalised FPKM sample_1 and sample_2 – FPKM of samples being compared; log2(fold_change) – log2(FPKM sample 2/FPKM sample 1), i.e. negative means sample 1 upregulated compared with sample 2, positive means sample 2 upregulated compared with sample 1; cuffdiff test_statistic – test statistic of differential expression test; p_value – p-value of differential expression test; q_value (FDR correction) – adjusted P-value of differential expression test. (XLSX 598 kb)
本数据集收录了各预刺激-攻击处理组(以完全未处理对照组为参照)的全部差异表达基因(differentially expressed genes)列表,存储为XLSX格式文件。相关列的说明如下:
1. sample_1与sample_2:待比较的两组处理组;
2. 样本1与样本2的标准化FPKM值:对应两组待比较样本的FPKM数值;
3. log₂(折叠变化值):即log₂(样本2 FPKM / 样本1 FPKM),若数值为负,代表样本1较样本2上调,若为正则代表样本2较样本1上调;
4. cuffdiff检验统计量:差异表达检验的检验统计量;
5. p值:差异表达检验的p值;
6. q值(错误发现率FDR校正):差异表达检验的校正后p值。
(文件大小:598 KB,格式为XLSX)
提供机构:
Figshare
创建时间:
2017-04-27



