Additional file 1 of Selection signatures and landscape genomics analysis to reveal climate adaptation of goat breeds

Additional file 1: Table S1. Goat sample information and climate data. Table S2. The top 1% candidate SNPs (red color) under selection identified by the Fst method. Table S3. The top 1% candidate SNPs (red color) under selection identified by XPEHH method. Table S4. The top 1% candidate SNPs (red color) under selection identified by the LFMM method. Table S5. Top 1000 SNPs associated with environmental variables identified by SAM method. Table S6. 74 candidate genes identified by four method (Fst, XPEHH, LFMM, and SAM). Table S7. 148 go and kegg terms identified by 74 candidate genes.

补充材料1：表S1 山羊样本信息与气候数据。表S2 经Fst方法鉴定的受选择前1%候选单核苷酸多态性（Single Nucleotide Polymorphisms，SNPs，标记为红色）。表S3 经XPEHH方法鉴定的受选择前1%候选单核苷酸多态性（标记为红色）。表S4 经LFMM方法鉴定的受选择前1%候选单核苷酸多态性（标记为红色）。表S5 经SAM方法鉴定的与环境变量相关的前1000个单核苷酸多态性。表S6 经四种方法（Fst、XPEHH、LFMM及SAM）共同筛选得到的74个候选基因。表S7 由上述74个候选基因富集得到的148个基因本体（Gene Ontology，GO）与京都基因与基因组百科全书（Kyoto Encyclopedia of Genes and Genomes，KEGG）注释条目。