Ras/MAPK ASD epistasis top results.
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https://figshare.com/articles/dataset/Ras_MAPK_ASD_epistasis_top_results_/4545388
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The unique epistatic SNP pairs with P < 2.9x10-9 are listed in the table. For each SNP, the following is listed in order of columns: rsID (Epistatic SNP), chromosome (CHR), position (BP, reference version hg19), minor allele frequency in the ASD dataset (MAF), nearest gene to the epistatic SNP, Ras/MAPK gene associated with the interacting SNP, and P-value for epistasis in cases (Epistasis ASD P) and pseudo-controls (Epistasis Control P). Locus pairs meeting genome-wide significance criteria (P < 7.6 x 10−10) are bolded. Main effects for epistatic and Ras/MAPK SNPs listed here are listed in S4 Table, with no SNPs showing P < 0.01.
本表格列出了所有P值小于2.9×10^-9的独特上位性单核苷酸多态性(Single Nucleotide Polymorphism,简称SNP)对。针对每个SNP,表格列按以下顺序依次展示相关信息:上位性SNP的rs标识符(rsID)、染色体(CHR)、碱基对位置(BP,参考基因组版本为hg19)、自闭症谱系障碍(Autism Spectrum Disorder,ASD)数据集内的次要等位基因频率(MAF)、该上位性SNP的邻近基因、与互作SNP相关的Ras/MAPK基因,以及病例组上位性P值(Epistasis ASD P)和伪对照组上位性P值(Epistasis Control P)。符合全基因组显著性判定标准(P值小于7.6×10^-10)的基因座对已进行加粗标注。本文所列上位性SNP及Ras/MAPK相关SNP的主效应数据已补充至S4表格中,且未出现P值小于0.01的SNP。
创建时间:
2017-02-01



