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Table A: Composition of 1,071 species included in phylogenetic reconstruction by paralog and taxonomic group.

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Table B: CASQ phylogeny sequences. Included are sequences used to construct a phylogenetic tree of CASQ1, CASQ2, and pre-duplication CASQ. Sequences that were pruned (with justification provided) or modified (with a description of the modification) are also included. Table C: CASQ expression date. RNA expression data in total counts, counts per million, and transcripts per million for CASQ1/CASQ2/CASQ. Source material is also provided. Table D: Key for columns in Table C. Table E: Expression of CASQ paralogs in muscle and non-muscle tissues of chicken. Table F: Expression of CASQ paralogs in non-muscle tissues of birds. Table G: Table of chordate protein and nucleotide sequences (when available) obtained through search efforts. De novo assembly sequences are not included. Table H: Table of non-chordate protein and nucleotide sequences obtained through search efforts. Table I: NCBI Reference Transcriptomes used for kallisto mapping (XLSX)

表B:肌集钙蛋白(CASQ)系统发育序列。收录了用于构建CASQ1、CASQ2及复制前CASQ的系统发育树的序列,同时纳入了经过修剪(附修剪依据)或修饰(附修饰说明)的序列。表C:CASQ表达数据。涵盖CASQ1、CASQ2及CASQ的RNA表达数据,包含总计数、每百万计数(counts per million)及每百万转录本数(transcripts per million)三种形式,并提供了原始实验材料信息。表D:表C列名释义表。表E:鸡肌肉与非肌肉组织中CASQ旁系同源基因(paralogs)的表达情况。表F:鸟类非肌肉组织中CASQ旁系同源基因(paralogs)的表达情况。表G:经检索获取的脊索动物蛋白质及核苷酸序列(如有则收录),不包含从头组装(de novo assembly)序列。表H:经检索获取的非脊索动物蛋白质及核苷酸序列。表I:用于kallisto比对的NCBI参考转录组(XLSX格式)
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2025-04-11
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