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Additional file 10: of Comparative transcriptomics and proteomics of three different aphid species identifies core and diverse effector sets

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NIAID Data Ecosystem2026-03-09 收录
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https://figshare.com/articles/dataset/Additional_file_10_of_Comparative_transcriptomics_and_proteomics_of_three_different_aphid_species_identifies_core_and_diverse_effector_sets/4403297
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资源简介:
Clusters. Resulting clusters (one line per cluster) from aphid sequences subjected to MCL clustering analysis (BLAST-MCL-clustering). Another clustering method was used to identify 1:1 orthologues by using reciprocal best BLAST hit analysis of all the datasets, resulting in an RBBH-orthologues network (one line per cluster). Putative pioneer effectors were identified and their sequences are reported. (XLSX 4051 kb)

本数据集包含两类聚类结果:其一为经BLAST-MCL聚类分析处理的蚜虫序列所生成的聚类结果,每个聚类独占一行;其二为采用另一聚类方法,通过对全部数据集开展双向最佳BLAST比对分析以鉴定一对一直系同源基因,由此构建得到的RBBH直系同源基因网络,每个聚类亦独占一行。此外,本数据集还收录了经鉴定得到的推定先锋效应因子序列信息。本数据集文件格式为XLSX,文件大小为4051 kb。
创建时间:
2016-12-15
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