MOESM4 of Expression of Aspergillus niger CAZymes is determined by compositional changes in wheat straw generated by hydrothermal or ionic liquid pretreatments

Additional file 4: Table S3. Genes in Venn diagram and pectin related gene expression. The file contains lists, identity and expression values of the genes in different parts of the Venn diagram in Fig. 5a and the expression patterns of the genes annotated by Martens-Uzunova and Schaap [35] acting on pectin. Induced was considered as significantly higher transcript abundance (DESeq p adj < 0.05 log2 FC of ⠼ 3) on lignocellulose compared to the glucose control, along with FPKM of ⠼ 50 on lignocellulose.

附加文件4：表S3：维恩图中的基因与果胶相关基因表达。本文件包含图5a中维恩图（Venn diagram）各分区内基因的列表、基因标识与表达量数值，以及Martens-Uzunova与Schaap[35]注释的果胶作用相关基因的表达模式。其中，诱导表达指相较于葡萄糖对照组，木质纤维素培养基中该基因的转录本丰度显著升高：经DESeq分析校正后的P值（p adj）<0.05，log₂倍变化（log2 FC）≥3，且该基因在木质纤维素培养基中的每百万片段每千碱基转录本片段数（FPKM）≥50。